RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 HOGA1Q86XE5 327 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 VRK3Q8IV63 474 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GAPTQ8N292 157 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 UMODL1-AS1Q8N2C9 162 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ZNF441Q8N8Z8 693 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TMEM178AQ8NBL3 297 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 BLNKQ8WV28 456 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 RDH5Q92781 318 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TMEM230Q96A57 120 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GPR21Q99679 349 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 FAAP24Q9BTP7 215 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 PTGES2Q9H7Z7 377 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 CALML5Q9NZT1 146 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 SHANK2Q9UPX8 1470 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ROBO1Q9Y6N7 1651 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 RGPD8O14715 1765 aaPredicted RBP3.06□□□□□ -1.92
SUB1-202ENST00000502453 TEX48A0A1B0GUV7 120 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 OR5H1A6NKK0 313 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ZNF207O43670 478 aaKnown RBP3.06□□□□□ -1.92
SUB1-202ENST00000502453 FGF17O60258 216 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GAGE7O76087 117 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GAGE12FP0CL80 117 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GAGE12GP0CL81 117 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GAGE12IP0CL82 117 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 MPC1LP0DKB6 136 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TCTAP57738 103 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TAS2R43P59537 309 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 RHOBP62745 196 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ZNF92Q03936 586 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 PLCXD2Q0VAA5 305 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GAGE4Q13068 117 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 EDDM3AQ14507 147 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 IZUMO4Q1ZYL8 232 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TEX261Q6UWH6 196 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 CALHM3Q86XJ0 350 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 OR51Q1Q8NH59 317 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TMEM54Q969K7 222 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 DNAJC30Q96LL9 226 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 MCHR1Q99705 422 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ULBP3Q9BZM4 244 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 KLK15Q9H2R5 256 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 FAM96AQ9H5X1 160 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 C14orf105Q9NVL8 296 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.06□□□□□ -1.92
SUB1-202ENST00000502453 PPLO60437 1756 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 SMCHD1A6NHR9 2005 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 NAIPQ13075 1403 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 FOXI3A8MTJ6 420 aaPredicted RBP3.06□□□□□ -1.92
SUB1-202ENST00000502453 RFXAPO00287 272 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 FAAHO00519 579 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GNG7O60262 68 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 PMS2P2O95744 297 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 CLDN1O95832 211 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 HPRT1P00492 218 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 SELEP16581 610 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 CXCL3P19876 107 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 PSMB1P20618 241 aaKnown RBP3.06□□□□□ -1.92
SUB1-202ENST00000502453 VDAC1P21796 283 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 MXD1Q05195 221 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 GUCA2BQ16661 112 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ZNF66Q6ZN08 573 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 DEFB128Q7Z7B8 93 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TGIF2LYQ8IUE0 185 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ACBD7Q8N6N7 88 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 ZNRF1Q8ND25 227 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 BEST4Q8NFU0 473 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 OR52E4Q8NGH9 312 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 OR10R2Q8NGX6 335 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 SMARCD1Q96GM5 515 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 DIRAS2Q96HU8 199 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 SUCNR1Q9BXA5 334 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 PRORYQ9H606 182 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 IDI2-AS1Q9NZ38 188 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 DNAJC27Q9NZQ0 273 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TMEM216Q9P0N5 145 aa3.06□□□□□ -1.92
SUB1-202ENST00000502453 TDRD15B5MCY1 1934 aaKnown RBP3.06□□□□□ -1.92
SUB1-202ENST00000502453 ECM29Q5VYK3 1845 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 CORTO00230 105 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 MRPS14O60783 128 aaKnown RBP3.05□□□□□ -1.92
SUB1-202ENST00000502453 FRMD6-AS1P0C7T7 363 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 ATF1P18846 271 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 HIST1H1TP22492 207 aaPredicted RBP3.05□□□□□ -1.92
SUB1-202ENST00000502453 FCGR2CP31995 323 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 ZNF324BQ6AW86 544 aaPredicted RBP3.05□□□□□ -1.92
SUB1-202ENST00000502453 STRADAQ7RTN6 431 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 GATD1Q8NB37 220 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 OR1L8Q8NGR8 309 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 ASB13Q8WXK3 278 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 CNBD2Q96M20 576 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 MARVELD1Q9BSK0 173 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 REG4Q9BYZ8 158 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 PLSCR3Q9NRY6 295 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 DMAC2Q9NW81 257 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 WSB1Q9Y6I7 421 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 V9GY05 133 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 USP32Q8NFA0 1604 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 IGSF9BQ9UPX0 1349 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 NRAPQ86VF7 1730 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 TRAV8-4A0A0B4J246 113 aa3.05□□□□□ -1.92
SUB1-202ENST00000502453 RBFOX3A6NFN3 312 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms