RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	PAN3	Q58A45	887 aa	Known RBP	10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	RSBN1	Q5VWQ0	802 aa	Predicted RBP	10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	ZNF497	Q6ZNH5	498 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	DCDC5	Q6ZRR9	648 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394		Q6ZS49	121 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	HOGA1	Q86XE5	327 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	BPIFB2	Q8N4F0	458 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	OR4S1	Q8NGB4	309 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	SETD6	Q8TBK2	473 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	MRPL30	Q8TCC3	161 aa	Known RBP	10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	DEDD2	Q8WXF8	326 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	SNAPC3	Q92966	411 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	COQ2	Q96H96	371 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	SNX22	Q96L94	193 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	CCL19	Q99731	98 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	CMSS1	Q9BQ75	279 aa	Known RBP	10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	CHST6	Q9GZX3	395 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	PPA2	Q9H2U2	334 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	LIME1	Q9H400	295 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	C12orf4	Q9NQ89	552 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	KAAG1	Q9UBP8	84 aa		10.13	□□□□□ -0.79
MATR3-231	ENST00000502394	FBN2	P35556	2912 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394		A0A1B0GW55	424 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394		K7N7A8	449 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	HSPB6	O14558	160 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	FCN3	O75636	299 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	IGHV4-39	P01824	125 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	GYPA	P02724	150 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	CD74	P04233	296 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4L2	P0CJ85	424 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4L3	P0CJ86	424 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4L4	P0CJ87	422 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4L5	P0CJ88	424 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4L6	P0CJ89	424 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4L7	P0CJ90	424 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	BTG1	P62324	171 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4L9	Q6RFH8	374 aa	Predicted RBP	10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	ZNF561	Q8N587	486 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	TMEM229B	Q8NBD8	167 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DEFB108B	Q8NET1	73 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	TMEM246	Q9BRR3	403 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	RIMS4	Q9H426	269 aa	Predicted RBP	10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	ZNF665	Q9H7R5	613 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	CHODL	Q9H9P2	273 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	ETAA1	Q9NY74	926 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	TAS2R8	Q9NYW2	309 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	DUX4	Q9UBX2	424 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	PTPN13	Q12923	2485 aa		10.12	□□□□□ -0.79
MATR3-231	ENST00000502394	IGKV1D-8	A0A087WSZ0	117 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	ECD	O95905	644 aa	Predicted RBP	10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	MT-ND4	P03905	459 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	CSF1	P09603	554 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	GSTT2B	P0CG30	244 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	SELL	P14151	372 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	BTC	P35070	178 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	GABRA2	P47869	451 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	TMEM33	P57088	247 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	KRTAP10-9	P60411	292 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	SLC35E4	Q6ICL7	350 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	TOMM5	Q8N4H5	51 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	CCL13	Q99616	98 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	C7orf50	Q9BRJ6	194 aa	Known RBP	10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	FAM234A	Q9H0X4	552 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	NCOR1P1	Q9H4R4	102 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394		Q9N2K0	584 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	MBNL3	Q9NUK0	354 aa	Known RBP	10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	EDAR	Q9UNE0	448 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	LRBA	P50851	2863 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	NBPF19	A0A087WUL8	3843 aa		10.11	□□□□□ -0.79
MATR3-231	ENST00000502394	UTP20	O75691	2785 aa	Known RBP	10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	SPG11	Q96JI7	2443 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	MGST3	O14880	152 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	LYRM1	O43325	122 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	NDUFA2	O43678	99 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	TK1	P04183	234 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	CD3D	P04234	171 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	GIF	P27352	417 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	ERP29	P30040	261 aa	Known RBP	10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	RFX2	P48378	723 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	TAS2R19	P59542	299 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	AP3S2	P59780	193 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	IL13RA1	P78552	427 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	KCNJ8	Q15842	424 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	TMEM155	Q4W5P6	130 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	ZNF57	Q68EA5	555 aa	Predicted RBP	10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	LYPD2	Q6UXB3	125 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	FAM216B	Q8N7L0	139 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	ASCC1	Q8N9N2	400 aa	Known RBP	10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	ZNRF1	Q8ND25	227 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	BEST4	Q8NFU0	473 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	PPP1R35	Q8TAP8	253 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	NEK7	Q8TDX7	302 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	MAFIP	Q8WZ33	124 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	NRGN	Q92686	78 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	HRASLS	Q9HDD0	168 aa		10.1	□□□□□ -0.79
MATR3-231	ENST00000502394	MYOZ1	Q9NP98	299 aa	Predicted RBP	10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms