RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 MSGN1A6NI15 193 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 OR4C45A6NMZ5 311 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ST8SIA3O43173 380 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 EIF1BO60739 113 aaKnown RBP1.17□□□□□ -2.22
XRN1-214ENST00000498077 LYZL6O75951 148 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 KRT75O95678 551 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 OR4Q2P0C623 313 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 CECR9P0C854 216 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 TRAPPC2P0DI81 140 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 TRAPPC2BP0DI82 140 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 HTN1P15515 57 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ZNF25P17030 456 aaPredicted RBP1.17□□□□□ -2.22
XRN1-214ENST00000498077 EIF1P41567 113 aaKnown RBP1.17□□□□□ -2.22
XRN1-214ENST00000498077 RCAN1P53805 252 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 RHOGP84095 191 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 CDK18Q07002 472 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ZNF805Q5CZA5 627 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 MUC21Q5SSG8 566 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 FAM205BPQ63HN1 556 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ZNF530Q6P9A1 599 aaPredicted RBP1.17□□□□□ -2.22
XRN1-214ENST00000498077 SSBP3-AS1Q7Z2R9 100 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 WFDC3Q8IUB2 231 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 MMD2Q8IY49 270 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ADGRG5Q8IZF4 528 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 SERP2Q8N6R1 65 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 BRK1Q8WUW1 75 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ZNF524Q96C55 264 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 RNF183Q96D59 192 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ZHX1-C8orf76Q96EF9 292 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 CPB2Q96IY4 423 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 SLC45A3Q96JT2 553 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 LYZL4Q96KX0 146 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 IMMP2LQ96T52 175 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 TMEM246Q9BRR3 403 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ZNF2Q9BSG1 426 aaPredicted RBP1.17□□□□□ -2.22
XRN1-214ENST00000498077 C1QTNF7Q9BXJ2 289 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 FGFBP2Q9BYJ0 223 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 REG4Q9BYZ8 158 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 SMIM3Q9BZL3 60 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 TRIM6Q9C030 488 aaPredicted RBP1.17□□□□□ -2.22
XRN1-214ENST00000498077 OR52D1Q9H346 318 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 OSGEPL1Q9H4B0 414 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 PLEKHA2Q9HB19 425 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 TM9SF3Q9HD45 589 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 ELOVL2Q9NXB9 296 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 RSL24D1Q9UHA3 163 aaKnown RBP1.17□□□□□ -2.22
XRN1-214ENST00000498077 RABL2BQ9UNT1 228 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.17□□□□□ -2.22
XRN1-214ENST00000498077 ADAM18Q9Y3Q7 739 aa1.17□□□□□ -2.22
XRN1-214ENST00000498077 MROH5Q6ZUA9 1318 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ECM29Q5VYK3 1845 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ATP6AP2A0A1C7CYW4 349 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 A8MU76 341 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SDCBPO00560 298 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 TSPAN3O60637 253 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PRSS23O95084 383 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 IGLV2-14P01704 120 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 LRG1P02750 347 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CD74P04233 296 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 RPA2P15927 270 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A16P16260 332 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ERP29P30040 261 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 GCHFRP30047 84 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SSR2P43308 183 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PPICP45877 212 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF138P52744 262 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CLDN15P56746 228 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 OR10A3P58181 314 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF117Q03924 483 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TRIP6Q15654 476 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 WDR93Q6P2C0 686 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TMEM220Q6QAJ8 160 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SCGB1D4Q6XE38 83 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MEX3BQ6ZN04 569 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 C4orf19Q8IY42 314 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ATOH7Q8N100 152 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CPXCR1Q8N123 301 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SLC39A11Q8N1S5 342 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GPR137CQ8N3F9 429 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SEH1LQ96EE3 360 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 WWC2-AS2Q96NR7 200 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MYCBPQ99417 103 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 ARPC5LQ9BPX5 153 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TREX2Q9BQ50 279 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 NUDT22Q9BRQ3 303 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 HIGD2AQ9BW72 106 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TSSK6Q9BXA6 273 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 INIPQ9NRY2 104 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TMEM14CQ9P0S9 112 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 RHCGQ9UBD6 479 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GINS2Q9Y248 185 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PKP3Q9Y446 797 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 IGKV3OR2-268A0A0C4DH90 116 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ABHD14A-ACY1A0A1B0GW23 586 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PQU0 124 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PR80 420 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MFSD2BA6NFX1 497 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PRAC2D3DTV9 90 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 KLRF2D3W0D1 207 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 NDUFS6O75380 124 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms