RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TEX15Q9BXT5 2789 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 NCKAP5O14513 1909 aa5.35□□□□□ -1.55
SSBP1-213ENST00000496622 COL5A1P20908 1838 aaPredicted RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 EXPH5Q8NEV8 1989 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 TMEM269A0A1B0GVZ9 245 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 AQP7P3A6NL99 342 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF705EA8MWA4 302 aaPredicted RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 ARPC1BO15143 372 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 SLC19A2O60779 497 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 IFNA5P01569 189 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 RNASE1P07998 156 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 DBHP09172 617 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 CEACAM1P13688 526 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 CALCRP30988 508 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 TIMP3P35625 211 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 MNDAP41218 407 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 NPBWR1P48145 328 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 DAP3P51398 398 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 CLDN18P56856 261 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 TAS2R43P59537 309 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 EIF3IQ13347 325 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OPCMLQ14982 345 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 HAGHQ16775 308 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 SLC18B1Q6NT16 456 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 H3F3CQ6NXT2 135 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 GALNT16Q8N428 558 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 ZIC4Q8N9L1 334 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR9K2Q8NGE7 335 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR6N1Q8NGY5 312 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 ZBTB8AQ96BR9 441 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 SLC6A7Q99884 636 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 DEFB127Q9H1M4 99 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 RFNGQ9Y644 331 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 LHFPL6Q9Y693 200 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR5H14A6NHG9 310 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 C21orf140B9A014 251 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 P2RY10O00398 339 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 GNG7O60262 68 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 IGHG1P01857 330 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 TACSTD2P09758 323 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 UCHL1P09936 223 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 CSRP1P21291 193 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 NFYBP25208 207 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 RBMS1P29558 406 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OTX1P32242 354 aaPredicted RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 BRS3P32247 399 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 APLNRP35414 380 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 MTNR1BP49286 362 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 FOXG1P55316 489 aaPredicted RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 ZP4Q12836 540 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 FCN2Q15485 313 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 LDLRAD2Q5SZI1 272 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 HBMQ6B0K9 141 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR10K2Q6IF99 312 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 FAAP20Q6NZ36 180 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 STAC2Q6ZMT1 411 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 Q8N402 240 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 FDCSPQ8NFU4 85 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR2M7Q8NG81 312 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR2Z1Q8NG97 314 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR52N5Q8NH56 324 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 LGALS14Q8TCE9 139 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 ASB17Q8WXJ9 295 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 HIST1H2BAQ96A08 127 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 C4orf45Q96LM5 186 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OXGR1Q96P68 337 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 TECTBQ96PL2 329 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 OR2V2Q96R30 315 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 MBNL3Q9NUK0 354 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 MRPL15Q9P015 296 aaKnown RBP5.34□□□□□ -1.55
SSBP1-213ENST00000496622 TUBD1Q9UJT1 453 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF222Q9UK12 451 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 LIPGQ9Y5X9 500 aa5.34□□□□□ -1.55
SSBP1-213ENST00000496622 SVEP1Q4LDE5 3571 aa5.34□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF587BE7ETH6 402 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 F8WDY8 70 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 NPIPA3F8WFD2 350 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 M0R036 132 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 FGF7P21781 194 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 STOMP27105 288 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 ASCL1P50553 236 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 SPOCK1Q08629 439 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 Q499Y3 187 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 PDLIM3Q53GG5 364 aaPredicted RBP5.33□□□□□ -1.56
SSBP1-213ENST00000496622 ELFN2Q5R3F8 820 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 DRAM2Q6UX65 266 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 FCRLAQ7L513 359 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 ERASQ7Z444 233 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 TMPRSS12Q86WS5 348 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 CMTM1Q8IZ96 169 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 FNDC9Q8TBE3 224 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 SLAMF6Q96DU3 332 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 TTTY12Q9BZ98 90 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 CGGBP1Q9UFW8 167 aaPredicted RBP5.33□□□□□ -1.56
SSBP1-213ENST00000496622 HDGFL3Q9Y3E1 203 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 ROS1P08922 2347 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 PCNX1Q96RV3 2341 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 OR5H15A6NDH6 313 aa5.33□□□□□ -1.56
SSBP1-213ENST00000496622 F5H5K5 113 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms