RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 DCHS2Q6V1P9 2916 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 RNF212BA8MTL3 300 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 TFAP2AP05549 437 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 SLC2A2P11168 524 aaPredicted RBP7.25□□□□□ -1.25
U2AF1-212ENST00000496462 P2RX3P56373 397 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 TNK1Q13470 666 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 ZMYND11Q15326 602 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 WDR25Q64LD2 544 aaPredicted RBP7.25□□□□□ -1.25
U2AF1-212ENST00000496462 CALHM1Q8IU99 346 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 CMTM1Q8IZ96 169 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 ZNF488Q96MN9 340 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 AIFM2Q9BRQ8 373 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 ZNF69Q9UC07 566 aa7.25□□□□□ -1.25
U2AF1-212ENST00000496462 UBE2J1Q9Y385 318 aaPredicted RBP7.25□□□□□ -1.25
U2AF1-212ENST00000496462 SULT1C2O00338 296 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 MST1LQ2TV78 715 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 TMEM91Q6ZNR0 172 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 Q6ZSR3 168 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 BTN2A1Q7KYR7 527 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 ZNF554Q86TJ5 538 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 RTN4RL2Q86UN3 420 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 OR2AK2Q8NG84 335 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 OR10J5Q8NHC4 309 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 GTF3AQ92664 365 aaKnown RBP7.24□□□□□ -1.25
U2AF1-212ENST00000496462 ORAI1Q96D31 301 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 TSC22D3Q99576 134 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 NKX3-1Q99801 234 aaPredicted RBP7.24□□□□□ -1.25
U2AF1-212ENST00000496462 ST6GALNAC5Q9BVH7 336 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 SEBOXQ9HB31 216 aaPredicted RBP7.24□□□□□ -1.25
U2AF1-212ENST00000496462 C14orf166Q9Y224 244 aaKnown RBP7.24□□□□□ -1.25
U2AF1-212ENST00000496462 TOX4O94842 621 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 ZNF728P0DKX0 622 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 PSKH1P11801 424 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 IGFBP3P17936 291 aaPredicted RBP7.24□□□□□ -1.25
U2AF1-212ENST00000496462 RAB25P57735 213 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 CATR1Q13166 79 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 ZNF846Q147U1 533 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 MEF2DQ14814 521 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 TEX36Q5VZQ5 186 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 SUMF2Q8NBJ7 301 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 RPEQ96AT9 228 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 SDSLQ96GA7 329 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 MCUBQ9NWR8 336 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 HIF1ANQ9NWT6 349 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 KIAA1549Q9HCM3 1950 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 ODAMA1E959 279 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 APOA2P02652 100 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 CSF1P09603 554 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 PAX1P15863 534 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 DVL1P1P54792 670 aaPredicted RBP7.24□□□□□ -1.25
U2AF1-212ENST00000496462 FAM76BQ5HYJ3 339 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 SLC35E4Q6ICL7 350 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 CCDC107Q8WV48 283 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 CLCC1Q96S66 551 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 TLNRD1Q9H1K6 362 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 METTL8Q9H825 291 aaKnown RBP7.24□□□□□ -1.25
U2AF1-212ENST00000496462 KAAG1Q9UBP8 84 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 PITPNC1Q9UKF7 332 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 KPTNQ9Y664 436 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 LINC00312Q9Y6C7 94 aa7.24□□□□□ -1.25
U2AF1-212ENST00000496462 TRIM64CA6NLI5 447 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 RHBDL1O75783 438 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 LOXP28300 417 aaPredicted RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 LTC4SQ16873 150 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 NHLRC3Q5JS37 347 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 KRT74Q7RTS7 529 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 MRPL41Q8IXM3 137 aaKnown RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 CCDC71LQ8N9Z2 235 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 GHITMQ9H3K2 345 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 LIME1Q9H400 295 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 OR2S2Q9NQN1 319 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 NECAP2Q9NVZ3 263 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 MTCH1Q9NZJ7 389 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 KIF25Q9UIL4 384 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 HSF4Q9ULV5 492 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 PRELID3BQ9Y3B1 194 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 ITPR3Q14573 2671 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 M0R1W7 72 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 GEMIN2O14893 280 aaKnown RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 ST8SIA5O15466 376 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 HIST1H1DP16402 221 aaKnown RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 ATPAF1Q5TC12 328 aaPredicted RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 LRRTM1Q86UE6 522 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 TOMM5Q8N4H5 51 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 RPS4Y2Q8TD47 263 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 RGP1Q92546 391 aaPredicted RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 SUCNR1Q9BXA5 334 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 JMJD1CQ15652 2540 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 WNT9BO14905 357 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 LY6HO94772 140 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 PTBP3O95758 552 aaKnown RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 IGHV2-70P01814 119 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 SMIM18P0DKX4 95 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 PTBP1P26599 531 aaKnown RBP eCLIP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 ERP29P30040 261 aaKnown RBP7.23□□□□□ -1.25
U2AF1-212ENST00000496462 PMELP40967 661 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 ECI1P42126 302 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 ARF6P62330 175 aa7.23□□□□□ -1.25
U2AF1-212ENST00000496462 ZNF45Q02386 682 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms