RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 SLC25A5P05141 298 aaKnown RBP11.56□□□□□ -0.56
PTPRF-215ENST00000496447 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 ZNF770Q6IQ21 691 aaPredicted RBP11.56□□□□□ -0.56
PTPRF-215ENST00000496447 ZAR1Q86SH2 424 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 ADIPOR1Q96A54 375 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 NAA60Q9H7X0 242 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 CA10Q9NS85 328 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 CES1P1Q9UKY3 287 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 MS4A18H0YCH9 400 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 PTP4A3O75365 173 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 SFT2D2O95562 160 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 FCER1GP30273 86 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 SCAND1P57086 179 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 MS4A18Q3C1V0 323 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 AWAT1Q58HT5 328 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 ETV3LQ6ZN32 361 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 ZNF600Q6ZNG1 722 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 SSX8Q7RTT4 187 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 OR11H7Q8NGC8 314 aa11.56□□□□□ -0.56
PTPRF-215ENST00000496447 CACNA1CQ13936 2221 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 SOX15O60248 233 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 C19orf35Q6ZS72 473 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
PTPRF-215ENST00000496447 OR1A1Q9P1Q5 309 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 NEU3Q9UQ49 428 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 PQLC2LA1A4F0 135 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 DNPH1O43598 174 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 ERVFC1-1P60608 527 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-215ENST00000496447 CLN8Q9UBY8 286 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 MTFP1Q9UDX5 166 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 LYZP61626 148 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 MUC20Q8N307 709 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-215ENST00000496447 C10orf35Q96D05 121 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 KNTC1P50748 2209 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 ADAMTSL1Q8N6G6 1762 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 HOXD4P09016 255 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-215ENST00000496447 FOXL2P58012 376 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 TIAL1Q01085 375 aaKnown RBP eCLIP11.55□□□□□ -0.567e-10■□□□□ 9
PTPRF-215ENST00000496447 CEBPEQ15744 281 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 MDP1Q86V88 176 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 GPR27Q9NS67 375 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 PILRBQ9UKJ0 227 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 DMRT1Q9Y5R6 373 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 IGHA1P01876 353 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 BGLAPP02818 100 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 PRF1P14222 555 aa11.55□□□□□ -0.56
PTPRF-215ENST00000496447 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 PAX5Q02548 391 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 TMEM52Q8NDY8 209 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 OR1L4Q8NGR5 311 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 BLNKQ8WV28 456 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 RAB18Q9NP72 206 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 SLC45A2Q9UMX9 530 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 TRDCB7Z8K6 153 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 PLA2G10O15496 165 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 GSTZ1O43708 216 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-215ENST00000496447 RPL13AP40429 203 aaKnown RBP11.54□□□□□ -0.56
PTPRF-215ENST00000496447 GPR6P46095 362 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-215ENST00000496447 NTNG2Q96CW9 530 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 WDR13Q9H1Z4 485 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 SLC2A9Q9NRM0 540 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 DOK5Q9P104 306 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 TRPM6Q9BX84 2022 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 IGHV1-45A0A0A0MS14 117 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 CTDSPLO15194 276 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 CLEC12BQ2HXU8 276 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 SLC25A22Q9H936 323 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 NAGKQ9UJ70 344 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 J3QT63 122 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 CXCL3P19876 107 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 USF1P22415 310 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-215ENST00000496447 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
PTPRF-215ENST00000496447 F5H697 171 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 OR5R1Q8NH85 324 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 MSL2Q9HCI7 577 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 SLC52A3Q9NQ40 469 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 DTX4Q9Y2E6 619 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 WSB1Q9Y6I7 421 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 OR5AC1P0C628 307 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 GZMHP20718 246 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 TGIF2LYQ8IUE0 185 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 TGIF2LXQ8IUE1 241 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 PRDM6Q9NQX0 595 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 IL17BQ9UHF5 180 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 NPTNQ9Y639 398 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 PMELP40967 661 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 OR10AC1Q8NH08 325 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 R3HDM4Q96D70 268 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 IGHV3OR15-7A0A075B7D8 119 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 TMEM210A6NLX4 147 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 GEMIN2O14893 280 aaKnown RBP11.53□□□□□ -0.56
PTPRF-215ENST00000496447 ACAA1P09110 424 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-215ENST00000496447 ORM2P19652 201 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 SLC25A45Q8N413 288 aa11.53□□□□□ -0.56
PTPRF-215ENST00000496447 YTHDF2Q9Y5A9 579 aaKnown RBP11.53□□□□□ -0.56
PTPRF-215ENST00000496447 CELA2AP08217 269 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms