RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 OR13C5Q8NGS8 318 aa11.43□□□□□ -0.58
VTI1A-209ENST00000496445 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
VTI1A-209ENST00000496445 ZNF596Q8TC21 504 aa11.43□□□□□ -0.58
VTI1A-209ENST00000496445 GPR148Q8TDV2 347 aa11.43□□□□□ -0.58
VTI1A-209ENST00000496445 TNFAIP8L1Q8WVP5 186 aa11.43□□□□□ -0.58
VTI1A-209ENST00000496445 OR5M11Q96RB7 305 aa11.43□□□□□ -0.58
VTI1A-209ENST00000496445 NR1H4Q96RI1 486 aaPredicted RBP11.43□□□□□ -0.58
VTI1A-209ENST00000496445 ZNF581Q9P0T4 197 aa11.43□□□□□ -0.58
VTI1A-209ENST00000496445 ZNF729A6NN14 1252 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-209ENST00000496445 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 DCKP27707 260 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 GLP1RP43220 463 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 VDAC2P45880 294 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-209ENST00000496445 OR3A4PP47883 348 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 BEAN1Q3B7T3 259 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 NSUN5P1Q3KNT7 163 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 PAN3Q58A45 887 aaKnown RBP11.42□□□□□ -0.58
VTI1A-209ENST00000496445 RSBN1Q5VWQ0 802 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-209ENST00000496445 ASCL4Q6XD76 172 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 SATL1Q86VE3 508 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 OR4D6Q8NGJ1 314 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 PLPPR1Q8TBJ4 325 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 TMEM106AQ96A25 262 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 ORAI1Q96D31 301 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 CPNE2Q96FN4 548 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-209ENST00000496445 KIRREL1Q96J84 757 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 GPER1Q99527 375 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 FAM192AQ9GZU8 254 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 CLEC2DQ9UHP7 191 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 KIF25Q9UIL4 384 aa11.42□□□□□ -0.58
VTI1A-209ENST00000496445 KBTBD11-OT1A0A1B0GTJ5 212 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 PAX5Q02548 391 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 C16orf82Q7Z2V1 217 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 SMIM19Q96E16 107 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
VTI1A-209ENST00000496445 MMP28Q9H239 520 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 LIN7BQ9HAP6 207 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 CALYQ9NYX4 217 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 OR6C3Q9NZP0 311 aa11.41□□□□□ -0.58
VTI1A-209ENST00000496445 DIMT1Q9UNQ2 313 aaKnown RBP11.41□□□□□ -0.58
VTI1A-209ENST00000496445 MEIKINA0A087WXM9 373 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 MAGEA13PA6NCF6 341 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 MAGEB3O15480 346 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 OGG1O15527 345 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 OR2F2O95006 317 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 CDRT1O95170 752 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 IL1AP01583 271 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 ALDOBP05062 364 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 CD2P06729 351 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 ADARB1P78563 741 aaKnown RBP11.4□□□□□ -0.58
VTI1A-209ENST00000496445 RBM39Q14498 530 aaKnown RBP11.4□□□□□ -0.58
VTI1A-209ENST00000496445 RSU1Q15404 277 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 LRRC36Q1X8D7 754 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
VTI1A-209ENST00000496445 KPRPQ5T749 579 aaPredicted RBP11.4□□□□□ -0.58
VTI1A-209ENST00000496445 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 TMPRSS11AQ6ZMR5 421 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 NDUFA11Q86Y39 141 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 ZNF485Q8NCK3 441 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 CYGBQ8WWM9 190 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 STMN2Q93045 179 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 LEAP2Q969E1 77 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 PGLYRP3Q96LB9 341 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 SLC25A33Q9BSK2 321 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 NCOR1P1Q9H4R4 102 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 LINC00574Q9H8X3 128 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 IL36GQ9NZH8 169 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 ZNF281Q9Y2X9 895 aa11.4□□□□□ -0.58
VTI1A-209ENST00000496445 EXOSC1Q9Y3B2 195 aaKnown RBP11.4□□□□□ -0.58
VTI1A-209ENST00000496445 TRBV5-5A0A0J9YX44 114 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 SH2D7A6NKC9 451 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-209ENST00000496445 TOR1AO14656 332 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 HTR3BO95264 441 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 AMY1AP04745 511 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 AMY2AP04746 511 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 IGFBP3P17936 291 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-209ENST00000496445 NFYBP25208 207 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 BRS3P32247 399 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 ZNF93P35789 620 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-209ENST00000496445 RBM11P57052 281 aaKnown RBP11.39□□□□□ -0.59
VTI1A-209ENST00000496445 RPS11P62280 158 aaKnown RBP eCLIP11.39□□□□□ -0.59
VTI1A-209ENST00000496445 DOC2BQ14184 412 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 NHLRC3Q5JS37 347 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 DMKNQ6E0U4 476 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-209ENST00000496445 ZFP41Q8N8Y5 198 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 SUMF2Q8NBJ7 301 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 OR52N1Q8NH53 320 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 OR9G1Q8NH87 305 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 MRGPRDQ8TDS7 321 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
VTI1A-209ENST00000496445 IFT22Q9H7X7 185 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 TMEM138Q9NPI0 162 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 BABAM2Q9NXR7 383 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 IDI2-AS1Q9NZ38 188 aa11.39□□□□□ -0.59
VTI1A-209ENST00000496445 NOTCH3Q9UM47 2321 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms