RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CYR61O00622 381 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 KBTBD11O94819 623 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 BGLAPP02818 100 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 IGHV4-34P06331 123 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 MPLP40238 635 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 TFPI2P48307 235 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 COL9A2Q14055 689 aaPredicted RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 TCEA2Q15560 299 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 LSRQ86X29 649 aaPredicted RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 OR4N5Q8IXE1 308 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 D2HGDHQ8N465 521 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 ARHGAP5-AS1Q96IT6 56 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 C1orf147Q96MC9 270 aaPredicted RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 HDAC8Q9BY41 377 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 OR10A2Q9H208 303 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 SLC2A9Q9NRM0 540 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 PTRH2Q9Y3E5 179 aaKnown RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 OTOGLQ3ZCN5 2332 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 LRRK1Q38SD2 2015 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 LOC105371242A0A075B767 164 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 OR2J2O76002 312 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 HPNP05981 417 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 HOXC12P31275 282 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 DCAF7P61962 342 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 ARF6P62330 175 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 RPL19P84098 196 aaKnown RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 PMS2CLQ68D20 193 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 TMEM252Q8N6L7 170 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 OR2V1Q8NHB1 315 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 SMIM12Q96EX1 92 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 PARD6GQ9BYG4 376 aaPredicted RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 ARRDC1-AS1Q9H2J1 176 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 CDC42EP3Q9UKI2 254 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 LAMTOR2Q9Y2Q5 125 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 MRPS2Q9Y399 296 aaKnown RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 PI4KAP42356 2102 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 FOXI3A8MTJ6 420 aaPredicted RBP7.88□□□□□ -1.15
HPS4-217ENST00000496385 VENTXO95231 258 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 CD99P14209 185 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 TUBG1P23258 451 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 PIGPP57054 158 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 ERVS71-1P61550 626 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 NHLH1Q02575 133 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 MPV17LQ2QL34 196 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 TMEM41BQ5BJD5 291 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 CBLN3Q6UW01 205 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 OR1L6Q8NGR2 347 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 CMTM2Q8TAZ6 248 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 RELTQ969Z4 430 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 VPS25Q9BRG1 176 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 VN1R1Q9GZP7 353 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 ZNF319Q9P2F9 582 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 PXMP4Q9Y6I8 212 aa7.88□□□□□ -1.15
HPS4-217ENST00000496385 IGHV2OR16-5A0A0B4J2B6 119 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 IGSF23A1L1A6 192 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 FAM24AA6NFZ4 105 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 RNF212BA8MTL3 300 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 P2RY10O00398 339 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 TIAF1O95411 115 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 IGLV3-19P01714 112 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 CFIP05156 583 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 SPTBP11277 2137 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 WNT5AP41221 380 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 RPL15P61313 204 aaKnown RBP7.87□□□□□ -1.15
HPS4-217ENST00000496385 RPL27P61353 136 aaKnown RBP7.87□□□□□ -1.15
HPS4-217ENST00000496385 EXOSC7Q15024 291 aaKnown RBP7.87□□□□□ -1.15
HPS4-217ENST00000496385 ADIRFQ15847 76 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 ABCA11PQ4W5N1 156 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 LYSMD4Q5XG99 296 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 KIAA0895LQ68EN5 471 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 LYZL2Q7Z4W2 148 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 VN1R4Q7Z5H5 301 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 MARCH3Q86UD3 253 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 C20orf196Q8IYI0 205 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 OR4C5Q8NGB2 326 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 OR52M1Q8NGK5 317 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 ZNF519Q8TB69 540 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 ADAMTS18Q8TE60 1221 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 RTN4IP1Q8WWV3 396 aaPredicted RBP7.87□□□□□ -1.15
HPS4-217ENST00000496385 MSI2Q96DH6 328 aaKnown RBP7.87□□□□□ -1.15
HPS4-217ENST00000496385 TM4SF19Q96DZ7 209 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 NUDT11Q96G61 164 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 RASL10BQ96S79 203 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 RNF2Q99496 336 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 RALGAPA1Q6GYQ0 2036 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 ADAMTS9Q9P2N4 1935 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 FAM166BA8MTA8 275 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 METTL12A8MUP2 240 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 ZNF878C9JN71 531 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 SLC16A7O60669 478 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 DDAH2O95865 285 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 IGKV1D-16P01601 117 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 IGHMP01871 453 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 CD55P08174 381 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 ZNF823P16415 610 aa7.87□□□□□ -1.15
HPS4-217ENST00000496385 BMI1P35226 326 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms