RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 KIR2DS4P43632 304 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 SRSF3P84103 164 aaKnown RBP13.13□□□□□ -0.31
CALD1-222ENST00000495522 IL13RA2Q14627 380 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 KIR2DS1Q14954 304 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 ZNF766Q5HY98 468 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 ATP1A1-AS1Q5TC04 95 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 GPR157Q5UAW9 335 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 FBXW9Q5XUX1 488 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 HAGHLQ6PII5 290 aaPredicted RBP13.13□□□□□ -0.31
CALD1-222ENST00000495522 ZNF573Q86YE8 665 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 BCL2L2Q92843 193 aaPredicted RBP13.13□□□□□ -0.31
CALD1-222ENST00000495522 SPACA1Q9HBV2 294 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 TREM1Q9NP99 234 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 SHANK1Q9Y566 2161 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 ARGFXA6NJG6 315 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 SLC22A20A6NK97 555 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 ST8SIA3O43173 380 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 FBXO24O75426 580 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 GLAP06280 429 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 SCTP09683 121 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 LPAR6P43657 344 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 KCNJ3P48549 501 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 RND3P61587 244 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 GNG3P63215 75 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 ARG2P78540 354 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 TGIF1Q15583 401 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 C10orf91Q5T1B1 145 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 MEX3BQ6ZN04 569 aaKnown RBP13.13□□□□□ -0.31
CALD1-222ENST00000495522 LDLRAD3Q86YD5 345 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 SLC35G3Q8N808 338 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 ZNF565Q8N9K5 539 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 CLRN3Q8NCR9 226 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 OR52M1Q8NGK5 317 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 ERGIC1Q969X5 290 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 TMEM222Q9H0R3 208 aa13.13□□□□□ -0.31
CALD1-222ENST00000495522 RIMS4Q9H426 269 aaPredicted RBP13.13□□□□□ -0.31
CALD1-222ENST00000495522 KNTC1P50748 2209 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 TRDCB7Z8K6 153 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 CTXN2P0C2S0 81 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 P2RY1P47900 373 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 CAV2P51636 162 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 MDP1Q86V88 176 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 SECTM1Q8WVN6 248 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 GTF3AQ92664 365 aaKnown RBP13.12□□□□□ -0.31
CALD1-222ENST00000495522 RHOFQ9HBH0 211 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 GP6Q9HCN6 339 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 PARP11Q9NR21 331 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 CARHSP1Q9Y2V2 147 aaKnown RBP13.12□□□□□ -0.31
CALD1-222ENST00000495522 ATP23Q9Y6H3 246 aa13.12□□□□□ -0.31
CALD1-222ENST00000495522 FAM74A7A6NL05 159 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 PRR33A8MZF0 331 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 GPR31O00270 319 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 HSPB6O14558 160 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 LILRA1O75019 489 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 CDS2O95674 445 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 FAM74A3Q4VXF1 159 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 SPIN3Q5JUX0 258 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 TBC1D26Q86UD7 250 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 TMEM178AQ8NBL3 297 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 OR4D5Q8NGN0 318 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 ARV1Q9H2C2 271 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 UQCC1Q9NVA1 299 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 POMT1Q9Y6A1 747 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 ARID1AO14497 2285 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 GATCO43716 136 aaKnown RBP13.11□□□□□ -0.31
CALD1-222ENST00000495522 TUSC2O75896 110 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 IL24Q13007 206 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 HERPUD1Q15011 391 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 GUCA2BQ16661 112 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 RNFT1Q5M7Z0 435 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 PUSL1Q8N0Z8 303 aaKnown RBP13.11□□□□□ -0.31
CALD1-222ENST00000495522 SUMF2Q8NBJ7 301 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 TMEM56Q96MV1 263 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 PKIBQ9C010 78 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 OR51B6Q9H340 312 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 TMEM231Q9H6L2 316 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 ZDHHC11Q9H8X9 412 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 RCL1Q9Y2P8 373 aaKnown RBP13.11□□□□□ -0.31
CALD1-222ENST00000495522 UBE2J1Q9Y385 318 aaPredicted RBP13.11□□□□□ -0.31
CALD1-222ENST00000495522 TMEM56-RWDD3S4R434 201 aa13.11□□□□□ -0.31
CALD1-222ENST00000495522 ZNF318Q5VUA4 2279 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 SLC34A2O95436 690 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 NOVA1P51513 510 aaKnown RBP13.1□□□□□ -0.31
CALD1-222ENST00000495522 F2RL1P55085 397 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 BTNL8Q6UX41 500 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 ZNF818PQ6ZRF7 136 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 C5orf24Q7Z6I8 188 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 SPAG16Q8N0X2 631 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 FAM58AQ8N1B3 248 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 BSCL2Q96G97 398 aaPredicted RBP13.1□□□□□ -0.31
CALD1-222ENST00000495522 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 SEC11CQ9BY50 192 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 SAV1Q9H4B6 383 aaPredicted RBP13.1□□□□□ -0.31
CALD1-222ENST00000495522 PLA2G2EQ9NZK7 142 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 ZDHHC8Q9ULC8 765 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 TRBV6-6A0A0A6YYG2 114 aa13.1□□□□□ -0.31
CALD1-222ENST00000495522 MUC1P15941 1255 aaPredicted RBP13.1□□□□□ -0.31
CALD1-222ENST00000495522 NUBP1P53384 320 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms