RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 GLP1RP43220 463 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 MTNR1BP49286 362 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 KRTAP10-11P60412 298 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 KISS1Q15726 138 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 THNSL2Q86YJ6 484 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 LINC00482Q8N8I6 264 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 OR51T1Q8NGJ9 327 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 RPEQ96AT9 228 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 PCDHB16Q9NRJ7 776 aa17.53■□□□□ 0.4
HDDC3-203ENST00000494993 AMMECR1Q9Y4X0 333 aaPredicted RBP17.53■□□□□ 0.4
HDDC3-203ENST00000494993 DNAH9Q9NYC9 4486 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 WI2-2373I1.2A0A1W2PRP0 233 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 H0YJX3 145 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 SULT1B1O43704 296 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 ALPLP05186 524 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 SNRNP70P08621 437 aaKnown RBP17.52■□□□□ 0.4
HDDC3-203ENST00000494993 VAX1Q5SQQ9 334 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 OR5D14Q8NGL3 314 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 MRPL48Q96GC5 212 aaKnown RBP17.52■□□□□ 0.4
HDDC3-203ENST00000494993 CALYQ9NYX4 217 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 KIF25Q9UIL4 384 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 ORC6Q9Y5N6 252 aa17.52■□□□□ 0.4
HDDC3-203ENST00000494993 KMT2CQ8NEZ4 4911 aaKnown RBP17.51■□□□□ 0.39
HDDC3-203ENST00000494993 SNTNA6NMZ2 147 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 E9PQ18 207 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 J3QR06 171 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 HSPB6O14558 160 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 ATP5HO75947 161 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 EGFEM1PQ0D2K5 195 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 GALEQ14376 348 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 PAN3Q58A45 887 aaKnown RBP17.51■□□□□ 0.39
HDDC3-203ENST00000494993 ZNF691Q5VV52 312 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 ELP2Q6IA86 826 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 ETV3LQ6ZN32 361 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 LHFPL3Q86UP9 236 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 SERPINA12Q8IW75 414 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 PARP16Q8N5Y8 322 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 ZNF565Q8N9K5 539 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 OR13A1Q8NGR1 328 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 OR56B4Q8NH76 319 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 LGALS12Q96DT0 336 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 ALG8Q9BVK2 526 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 NCOR1P1Q9H4R4 102 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 IDI2-AS1Q9NZ38 188 aa17.51■□□□□ 0.39
HDDC3-203ENST00000494993 MEIKINA0A087WXM9 373 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 A0A1W2PPI3 338 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 EI24O14681 340 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 ZIK1Q3SY52 487 aaPredicted RBP17.5■□□□□ 0.39
HDDC3-203ENST00000494993 DEFB121Q5J5C9 76 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 SYS1Q8N2H4 156 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 PXT1Q8NFP0 134 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 OR51D1Q8NGF3 324 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 LEAP2Q969E1 77 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 NR1H4Q96RI1 486 aaPredicted RBP17.5■□□□□ 0.39
HDDC3-203ENST00000494993 MYCBPQ99417 103 aaPredicted RBP17.5■□□□□ 0.39
HDDC3-203ENST00000494993 FAM53CQ9NYF3 392 aa17.5■□□□□ 0.39
HDDC3-203ENST00000494993 TRAV24A0A0B4J272 114 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 TMEM212A6NML5 194 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 CIB2O75838 187 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 ZFPL1O95159 310 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 IL1AP01583 271 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 IGHV3-7P01780 117 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 RPSAP08865 295 aaKnown RBP17.49■□□□□ 0.39
HDDC3-203ENST00000494993 C21orf33P30042 268 aaPredicted RBP17.49■□□□□ 0.39
HDDC3-203ENST00000494993 HOXD3P31249 432 aaPredicted RBP17.49■□□□□ 0.39
HDDC3-203ENST00000494993 LPCAT4Q643R3 524 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 ZNF329Q86UD4 541 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 MRPL41Q8IXM3 137 aaKnown RBP17.49■□□□□ 0.39
HDDC3-203ENST00000494993 DRAM1Q8N682 238 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 C5orf56Q8N8D9 126 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 CNIH3Q8TBE1 160 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 PYDC1Q8WXC3 89 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 ZNF649Q9BS31 505 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 BARHL1Q9BZE3 327 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 GPR61Q9BZJ8 451 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 LINC00574Q9H8X3 128 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 ISG20L2Q9H9L3 353 aaKnown RBP17.49■□□□□ 0.39
HDDC3-203ENST00000494993 AASSQ9UDR5 926 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 PSG11Q9UQ72 335 aa17.49■□□□□ 0.39
HDDC3-203ENST00000494993 DYNC1I1O14576 645 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 TMEM11P17152 192 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 RPL23AP62750 156 aaKnown RBP17.48■□□□□ 0.39
HDDC3-203ENST00000494993 MADCAM1Q13477 382 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 DIAPH2-AS1Q14236 149 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 HES1Q14469 280 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 IL13RA2Q14627 380 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 ZSCAN26Q16670 478 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 RSBN1Q5VWQ0 802 aaPredicted RBP17.48■□□□□ 0.39
HDDC3-203ENST00000494993 C11orf87Q6NUJ2 197 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 OR5AK2Q8NH90 309 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 CHPT1Q8WUD6 406 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 DPF1Q92782 380 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 DHDHQ9UQ10 334 aa17.48■□□□□ 0.39
HDDC3-203ENST00000494993 NBEAL2Q6ZNJ1 2754 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 NPIPB11E5RHQ5 1161 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 E9PI62 339 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 FGF16O43320 207 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 GABRB1P18505 474 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 THBS3P49746 956 aa17.47■□□□□ 0.39
HDDC3-203ENST00000494993 RAB7AP51149 207 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms