RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	OR2G6	Q5TZ20	316 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	RSBN1	Q5VWQ0	802 aa	Predicted RBP	9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	ZBTB49	Q6ZSB9	765 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	SERPINA12	Q8IW75	414 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	PQLC1	Q8N2U9	271 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	CHST4	Q8NCG5	386 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	NR1H4	Q96RI1	486 aa	Predicted RBP	9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	C9orf16	Q9BUW7	83 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	JAM3	Q9BX67	310 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	LIN7B	Q9HAP6	207 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	MRPS18A	Q9NVS2	196 aa	Known RBP	9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	GLS2	Q9UI32	602 aa		9.28	□□□□□ -0.92
VTI1A-208	ENST00000494728	SNTN	A6NMZ2	147 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	ZNF729	A6NN14	1252 aa	Predicted RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	LEUTX	A8MZ59	168 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	DEGS1	O15121	323 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	CDRT1	O95170	752 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	LPL	P06858	475 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	NFYB	P25208	207 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	SSTR5	P35346	364 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	MTNR1B	P49286	362 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	RBM39	Q14498	530 aa	Known RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	PAN3	Q58A45	887 aa	Known RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	ARSJ	Q5FYB0	599 aa	Predicted RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	ELP2	Q6IA86	826 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR52W1	Q6IF63	320 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM53A	Q6NSI3	398 aa	Predicted RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	CCDC121	Q6ZUS5	278 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	RTN4RL2	Q86UN3	420 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR5AU1	Q8NGC0	362 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR5D14	Q8NGL3	314 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	CNIH3	Q8TBE1	160 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	ZNF596	Q8TC21	504 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	TNFAIP8L1	Q8WVP5	186 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	PHF21A	Q96BD5	680 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	RBMXL1	Q96E39	390 aa	Known RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	RBM14	Q96PK6	669 aa	Known RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM192A	Q9GZU8	254 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	FGF20	Q9NP95	211 aa	Predicted RBP	9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	INPP5E	Q9NRR6	644 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	CALY	Q9NYX4	217 aa		9.27	□□□□□ -0.93
VTI1A-208	ENST00000494728	MEIKIN	A0A087WXM9	373 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	KBTBD11-OT1	A0A1B0GTJ5	212 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728		A0A1W2PP11	408 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728		A0A1W2PPI3	338 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	PEX14	O75381	377 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR2F2	O95006	317 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	IL1A	P01583	271 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	CCDC159	P0C7I6	412 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	RAB3A	P20336	220 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	GNG10	P50151	68 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	GBX2	P52951	348 aa	Predicted RBP	9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	LTC4S	Q16873	150 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	C16orf82	Q7Z2V1	217 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	SATL1	Q86VE3	508 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728		Q8NFD4	153 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	PXT1	Q8NFP0	134 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR4D6	Q8NGJ1	314 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR56B4	Q8NH76	319 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	UBALD1	Q8TB05	177 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	MRGPRD	Q8TDS7	321 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	TMEM106A	Q96A25	262 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	RHOF	Q9HBH0	211 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	CLEC2D	Q9UHP7	191 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	PCDHGB5	Q9Y5G0	923 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728	STAB2	Q8WWQ8	2551 aa		9.26	□□□□□ -0.93
VTI1A-208	ENST00000494728		A0A1W2PPE3	182 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	FUOM	A2VDF0	154 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	MPZL2	O60487	215 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	IL13RA2	Q14627	380 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	ASCL4	Q6XD76	172 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	ZFP41	Q8N8Y5	198 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR4F17	Q8NGA8	305 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR9G1	Q8NH87	305 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	RFESD	Q8TAC1	157 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	MYDGF	Q969H8	173 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	MRPL48	Q96GC5	212 aa	Known RBP	9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728		Q96MT0	163 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR4F4	Q96R69	305 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	GPER1	Q99527	375 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	LINC00574	Q9H8X3	128 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	SMPD3	Q9NY59	655 aa	Predicted RBP	9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	OR6C3	Q9NZP0	311 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	PSG11	Q9UQ72	335 aa		9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	RPL36	Q9Y3U8	105 aa	Known RBP	9.25	□□□□□ -0.93
VTI1A-208	ENST00000494728	TRAV8-7	A0A075B6U6	113 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A18P	A6NE21	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A16P	A6NEW6	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A20P	A6NIJ5	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A9P	A6NNJ1	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A12P	A8MX19	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	FAM90A5P	A8MXJ8	464 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	NPIPB11	E5RHQ5	1161 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728		J3QR06	171 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	TOR1A	O14656	332 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	GEMIN2	O14893	280 aa	Known RBP	9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	XPNPEP2	O43895	674 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	HTR3B	O95264	441 aa		9.24	□□□□□ -0.93
VTI1A-208	ENST00000494728	ALDOB	P05062	364 aa		9.24	□□□□□ -0.93

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