RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 TRAV39A0A0B4J263 110 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 A0A1W2PPE3 182 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 ZNF729A6NN14 1252 aaPredicted RBP10.01□□□□□ -0.81
SKA1-205ENST00000494518 SLC16A6O15403 523 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 HCKP08631 526 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 TMEM225BP0DP42 221 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 LMO1P25800 156 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 RPL23AP62750 156 aaKnown RBP10.01□□□□□ -0.81
SKA1-205ENST00000494518 CDK5R1Q15078 307 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 C1orf146Q5VVC0 180 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 CCDC144NLQ6NUI1 221 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 KLHL30-AS1Q8NEE0 82 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 DPF1Q92782 380 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 HRASLS5Q96KN8 279 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 C4orf36Q96KX1 117 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 IMPAD1Q9NX62 359 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 CALYQ9NYX4 217 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 KIF25Q9UIL4 384 aa10.01□□□□□ -0.81
SKA1-205ENST00000494518 STAB2Q8WWQ8 2551 aa10□□□□□ -0.81
SKA1-205ENST00000494518 MEIKINA0A087WXM9 373 aa10□□□□□ -0.81
SKA1-205ENST00000494518 A0A087X0M5 115 aa10□□□□□ -0.81
SKA1-205ENST00000494518 KBTBD11-OT1A0A1B0GTJ5 212 aa10□□□□□ -0.81
SKA1-205ENST00000494518 A0A1B0GX30 115 aa10□□□□□ -0.81
SKA1-205ENST00000494518 OR4C45A6NMZ5 311 aa10□□□□□ -0.81
SKA1-205ENST00000494518 SERPINE3A8MV23 424 aa10□□□□□ -0.81
SKA1-205ENST00000494518 E9PQ18 207 aa10□□□□□ -0.81
SKA1-205ENST00000494518 H0YJX3 145 aa10□□□□□ -0.81
SKA1-205ENST00000494518 M0QZK8 103 aa10□□□□□ -0.81
SKA1-205ENST00000494518 DUS4LO95620 317 aaKnown RBP10□□□□□ -0.81
SKA1-205ENST00000494518 ISG15P05161 165 aa10□□□□□ -0.81
SKA1-205ENST00000494518 FAM106CPP0CH98 169 aa10□□□□□ -0.81
SKA1-205ENST00000494518 TMEM11P17152 192 aa10□□□□□ -0.81
SKA1-205ENST00000494518 THBS3P49746 956 aa10□□□□□ -0.81
SKA1-205ENST00000494518 RAB25P57735 213 aa10□□□□□ -0.81
SKA1-205ENST00000494518 EGFEM1PQ0D2K5 195 aa10□□□□□ -0.81
SKA1-205ENST00000494518 TMED1Q13445 227 aa10□□□□□ -0.81
SKA1-205ENST00000494518 PAN3Q58A45 887 aaKnown RBP10□□□□□ -0.81
SKA1-205ENST00000494518 OR2W3Q7Z3T1 314 aa10□□□□□ -0.81
SKA1-205ENST00000494518 C5orf56Q8N8D9 126 aa10□□□□□ -0.81
SKA1-205ENST00000494518 OR51D1Q8NGF3 324 aa10□□□□□ -0.81
SKA1-205ENST00000494518 OR10K1Q8NGX5 313 aa10□□□□□ -0.81
SKA1-205ENST00000494518 OR9G1Q8NH87 305 aa10□□□□□ -0.81
SKA1-205ENST00000494518 RFESDQ8TAC1 157 aa10□□□□□ -0.81
SKA1-205ENST00000494518 MRGPRDQ8TDS7 321 aa10□□□□□ -0.81
SKA1-205ENST00000494518 CREB3L1Q96BA8 519 aa10□□□□□ -0.81
SKA1-205ENST00000494518 PELI1Q96FA3 418 aa10□□□□□ -0.81
SKA1-205ENST00000494518 ZCCHC4Q9H5U6 513 aa10□□□□□ -0.81
SKA1-205ENST00000494518 OR6C3Q9NZP0 311 aa10□□□□□ -0.81
SKA1-205ENST00000494518 MYRFQ9Y2G1 1151 aa10□□□□□ -0.81
SKA1-205ENST00000494518 IGHV3-72A0A0B4J1Y9 119 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 TRAV24A0A0B4J272 114 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 A0A1W2PPI3 338 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 OOSP1A8MZH6 123 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 J3QR06 171 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 J3QRE1 110 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 IGKV1D-33P01593 117 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 IGKV1-33P01594 117 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 MT-ND2P03891 347 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 CSN2P05814 226 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 SSTR5P35346 364 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 ZP1P60852 638 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 ALKBH1Q13686 389 aaKnown RBP9.99□□□□□ -0.81
SKA1-205ENST00000494518 ZIK1Q3SY52 487 aaPredicted RBP9.99□□□□□ -0.81
SKA1-205ENST00000494518 FDX2Q6P4F2 183 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 LCNL1Q6ZST4 164 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 CHST4Q8NCG5 386 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 UBALD1Q8TB05 177 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 PLPPR1Q8TBJ4 325 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 RBMXL1Q96E39 390 aaKnown RBP9.99□□□□□ -0.81
SKA1-205ENST00000494518 OSBPL10Q9BXB5 764 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 IDI2-AS1Q9NZ38 188 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 ZNF581Q9P0T4 197 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 PSG11Q9UQ72 335 aa9.99□□□□□ -0.81
SKA1-205ENST00000494518 AMMECR1Q9Y4X0 333 aaPredicted RBP9.99□□□□□ -0.81
SKA1-205ENST00000494518 HUWE1Q7Z6Z7 4374 aaKnown RBP9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A18PA6NE21 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A16PA6NEW6 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A20PA6NIJ5 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 LINC01548A6NM66 108 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A9PA6NNJ1 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A12PA8MX19 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A5PA8MXJ8 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 IL1AP01583 271 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A15PP0C7V4 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A13PP0C7W8 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A14PP0C7W9 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FAM90A24PP0C7X0 464 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 FCGR1AP12314 374 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 REG1BP48304 166 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 KISS1Q15726 138 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 PIGYQ3MUY2 71 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 LCE2AQ5TA79 106 aaPredicted RBP9.98□□□□□ -0.81
SKA1-205ENST00000494518 ZNF691Q5VV52 312 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 LHFPL3Q86UP9 236 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 SATL1Q86VE3 508 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 SAXO1Q8IYX7 474 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 OR51T1Q8NGJ9 327 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 TSEN15Q8WW01 171 aaKnown RBP9.98□□□□□ -0.81
SKA1-205ENST00000494518 TFAP2CQ92754 450 aa9.98□□□□□ -0.81
SKA1-205ENST00000494518 B9D2Q9BPU9 175 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms