RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 FAM90A16PA6NEW6 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A20PA6NIJ5 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A8PA6NJQ4 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A7PA6NKC0 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A22PA8MWA6 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 TMEM14DPA8MWL7 114 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A12PA8MX19 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A5PA8MXJ8 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A23PA8MXZ1 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 BPNT1O95861 308 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A15PP0C7V4 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A13PP0C7W8 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A14PP0C7W9 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 FAM90A24PP0C7X0 464 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 ARSBP15848 533 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 RAB3BP20337 219 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 KCNJ3P48549 501 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 CLDN12P56749 244 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 OR10A3P58181 314 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 KLRD1Q13241 179 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 UNC119Q13432 240 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 P2RY14Q15391 338 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 RAB11BQ15907 218 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 KRTAP21-3Q3LHN1 58 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 RSBN1Q5VWQ0 802 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-208ENST00000494334 HCP5Q6MZN7 132 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 USP43Q70EL4 1123 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 KCNG3Q8TAE7 436 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-208ENST00000494334 CORO2AQ92828 525 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 CHCHD6Q9BRQ6 235 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 SUCNR1Q9BXA5 334 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 BARHL1Q9BZE3 327 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 RNF167Q9H6Y7 350 aa11.08□□□□□ -0.64
COL1A1-208ENST00000494334 RCC2Q9P258 522 aaKnown RBP11.08□□□□□ -0.64
COL1A1-208ENST00000494334 UBE2J1Q9Y385 318 aaPredicted RBP11.08□□□□□ -0.64
COL1A1-208ENST00000494334 TRGV10A0A0A0MS01 117 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 hCG_1809904A0A1W2PP81 198 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 A0A1W2PPE2 198 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 A0A1W2PR64 198 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 A0A1W2PRV1 198 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 TCF21O43680 179 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 SMIM18P0DKX4 95 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 UBE2E1P51965 193 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 RPS27AP62979 156 aaKnown RBP11.07□□□□□ -0.64
COL1A1-208ENST00000494334 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
COL1A1-208ENST00000494334 PAX5Q02548 391 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 GUCA2AQ02747 115 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 C2orf76Q3KRA6 126 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 HES5Q5TA89 166 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 NCR3LG1Q68D85 454 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 SIGIRRQ6IA17 410 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 ZNF782Q6ZMW2 699 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-208ENST00000494334 TRAPPC6BQ86SZ2 158 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 NR2C2APQ86WQ0 139 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 SIGLECL1Q8N7X8 197 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 OR51D1Q8NGF3 324 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 FAM3DQ96BQ1 224 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 YIPF6Q96EC8 236 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 TM2D1Q9BX74 207 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 TMEM59Q9BXS4 323 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 NCOR1P1Q9H4R4 102 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 SPACA1Q9HBV2 294 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 STEAP1Q9UHE8 339 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 KIF25Q9UIL4 384 aa11.07□□□□□ -0.64
COL1A1-208ENST00000494334 MEIKINA0A087WXM9 373 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 A0A0A6YYJ9 748 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 LOC100506127A0A0U1RQW1 187 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 MDFIC2A0A1B0GVS7 189 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 A0A1W2PRD5 423 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 A0A1W2PRF3 423 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 A0A1W2PRM7 423 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 IFITM5A6NNB3 132 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 MMP23AO75900 390 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 VENTXO95231 258 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 RBP4P02753 201 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 CGB3P0DN86 165 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 CGB7P0DN87 165 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 IGHV1-8P0DP01 117 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 FUT3P21217 361 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 CFPP27918 469 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 HILS1P60008 231 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 DEFB112Q30KQ8 113 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 SLC35E4Q6ICL7 350 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 RAB12Q6IQ22 244 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 OR2W3Q7Z3T1 314 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 TPRA1Q86W33 373 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 PNKDQ8N490 385 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 CYYR1Q96J86 154 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 KCTD7Q96MP8 289 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 NICN1Q9BSH3 213 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 CENPOQ9BU64 300 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 PRDM13Q9H4Q3 707 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 HEXA-AS1Q9H8Q6 139 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 TAS2R3Q9NYW6 316 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 OR6C3Q9NZP0 311 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 PEX16Q9Y5Y5 336 aa11.06□□□□□ -0.64
COL1A1-208ENST00000494334 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms