RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 FBXO24O75426 580 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 HNF1AP20823 631 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 FPR2P25090 351 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 ARR3P36575 388 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 CCL11P51671 97 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 PMP22Q01453 160 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 CHRFAM7AQ494W8 412 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 CLEC9AQ6UXN8 241 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 OR56B2PQ8NGI1 322 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 ARL11Q969Q4 196 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 REPIN1Q9BWE0 567 aaKnown RBP11.86□□□□□ -0.51
VCP-207ENST00000493886 NMES1Q9C002 83 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 OSGIN2Q9Y236 505 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 SLC22A20A6NK97 555 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 CRYBA1P05813 215 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 NPBWR1P48145 328 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 RNF212Q495C1 297 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 RPL7L1Q6DKI1 246 aaKnown RBP11.86□□□□□ -0.51
VCP-207ENST00000493886 RPUSD3Q6P087 351 aaKnown RBP11.86□□□□□ -0.51
VCP-207ENST00000493886 SVBPQ8N300 66 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 SCGB3A2Q96PL1 93 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 FAAP24Q9BTP7 215 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 IL36GQ9NZH8 169 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 ZNF629Q9UEG4 869 aaPredicted RBP11.86□□□□□ -0.51
VCP-207ENST00000493886 HSF4Q9ULV5 492 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 NFYBP25208 207 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 OR2A2Q6IF42 318 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 REC114Q7Z4M0 266 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 PEG10Q86TG7 708 aaKnown RBP11.85□□□□□ -0.51
VCP-207ENST00000493886 OSR2Q8N2R0 312 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 FDCSPQ8NFU4 85 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 RNF141Q8WVD5 230 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 APOBEC3DQ96AK3 386 aaPredicted RBP11.85□□□□□ -0.51
VCP-207ENST00000493886 RPH3ALQ9UNE2 315 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 A8MXE2 369 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 H2AFB1P0C5Y9 115 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 PIGYQ3MUY2 71 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 BRICD5Q6PL45 260 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 FBXL14Q8N1E6 418 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 DYRK2Q92630 601 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 POM121L2Q96KW2 1035 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 DOCK7Q96N67 2140 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 AK3Q9UIJ7 227 aa11.85□□□□□ -0.51
VCP-207ENST00000493886 F8VVB4 439 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 F8VWA3 439 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 GEMIN2O14893 280 aaKnown RBP11.84□□□□□ -0.51
VCP-207ENST00000493886 FGF16O43320 207 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 CHATP28329 748 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 PTGER4P35408 488 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 PLP2Q04941 152 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 MALLQ13021 153 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 MRPL21Q7Z2W9 205 aaKnown RBP11.84□□□□□ -0.51
VCP-207ENST00000493886 CALHM1Q8IU99 346 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 SLC30A7Q8NEW0 376 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 S100PBPQ96BU1 408 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 HSBP1L1C9JCN9 74 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 H7C1Q1 480 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 MSTNO14793 375 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 WT1P19544 449 aaPredicted RBP11.84□□□□□ -0.51
VCP-207ENST00000493886 CYCSP99999 105 aaKnown RBP11.84□□□□□ -0.51
VCP-207ENST00000493886 FBXW9Q5XUX1 488 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 PRSS54Q6PEW0 395 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 SULT4A1Q9BR01 284 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
VCP-207ENST00000493886 ST3GAL6Q9Y274 331 aa11.84□□□□□ -0.51
VCP-207ENST00000493886 FAM221AA4D161 298 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 IL18BPO95998 194 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 NGFP01138 241 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 OPRM1P35372 400 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 CDPF1Q6NVV7 123 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 ZNF611Q8N823 705 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 OR10AD1Q8NGE0 317 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 OR1K1Q8NGR3 316 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 TOMM40LQ969M1 308 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 RAB18Q9NP72 206 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 STARD10Q9Y365 291 aa11.83□□□□□ -0.51
VCP-207ENST00000493886 SS18L1O75177 396 aaPredicted RBP11.83□□□□□ -0.52
VCP-207ENST00000493886 FAM157CP0CG43 387 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 PRDX4Q13162 271 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 IAH1Q2TAA2 248 aaPredicted RBP11.83□□□□□ -0.52
VCP-207ENST00000493886 MST1LQ2TV78 715 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 SLAMF9Q96A28 289 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 CNTNAP3BQ96NU0 1288 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 ZNF2Q9BSG1 426 aaPredicted RBP11.83□□□□□ -0.52
VCP-207ENST00000493886 GP6Q9HCN6 339 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 CRIM1Q9NZV1 1036 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 LSM5Q9Y4Y9 91 aaKnown RBP11.83□□□□□ -0.52
VCP-207ENST00000493886 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.52
VCP-207ENST00000493886 AKR1C3P42330 323 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 LPAR6P43657 344 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 NUTF2P61970 127 aaKnown RBP11.83□□□□□ -0.52
VCP-207ENST00000493886 SP6Q3SY56 376 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 UQCC3Q6UW78 93 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 SLC25A26Q70HW3 274 aa11.83□□□□□ -0.52
VCP-207ENST00000493886 ANXA10Q9UJ72 324 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms