RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CFPP27918 469 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 KCNJ3P48549 501 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 RBM11P57052 281 aaKnown RBP5.68□□□□□ -1.5
TOP3A-207ENST00000493648 ATXN7L3Q14CW9 347 aaPredicted RBP5.68□□□□□ -1.5
TOP3A-207ENST00000493648 AANATQ16613 207 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 MPV17LQ2QL34 196 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 PIGYQ3MUY2 71 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 SLC22A6Q4U2R8 563 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 AWAT1Q58HT5 328 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 NHLRC3Q5JS37 347 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 ATAD3CQ5T2N8 411 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 GLT8D1Q68CQ7 371 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 GLIPR1L1Q6UWM5 242 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 CEACAM19Q7Z692 300 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 NKAIN3Q8N8D7 197 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 OR11H6Q8NGC7 330 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 OR4D6Q8NGJ1 314 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 OR4F5Q8NH21 305 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 PHYHIPQ92561 330 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 SGCDQ92629 289 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 MUL1Q969V5 352 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 MALSU1Q96EH3 234 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 NKX3-1Q99801 234 aaPredicted RBP5.68□□□□□ -1.5
TOP3A-207ENST00000493648 SSX3Q99909 188 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 UQCC2Q9BRT2 126 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF747Q9BV97 191 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 SLITRK2Q9H156 845 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 TMEM133Q9H2Q1 129 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 NCOR1P1Q9H4R4 102 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 IFT22Q9H7X7 185 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 BEX1Q9HBH7 125 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 GHRLQ9UBU3 117 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 MRPS28Q9Y2Q9 187 aaKnown RBP5.68□□□□□ -1.5
TOP3A-207ENST00000493648 TBL2Q9Y4P3 447 aaKnown RBP5.68□□□□□ -1.5
TOP3A-207ENST00000493648 SESN1Q9Y6P5 492 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 KIAA2026Q5HYC2 2103 aa5.68□□□□□ -1.5
TOP3A-207ENST00000493648 MEIKINA0A087WXM9 373 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 IGHV2-26A0A0B4J1V2 119 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 TRAV24A0A0B4J272 114 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 MAGEA13PA6NCF6 341 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 FAM90A8PA6NJQ4 464 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 H3BUX3 64 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 HSPB6O14558 160 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 TOR1AO14656 332 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 GEMIN2O14893 280 aaKnown RBP5.67□□□□□ -1.5
TOP3A-207ENST00000493648 DENRO43583 198 aaKnown RBP5.67□□□□□ -1.5
TOP3A-207ENST00000493648 GPR137BO60478 399 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 MRPS14O60783 128 aaKnown RBP5.67□□□□□ -1.5
TOP3A-207ENST00000493648 CLPXO76031 633 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 NDUFA7O95182 113 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 CPEP16870 476 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 GZMHP20718 246 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 OMGP23515 440 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 CDK2P24941 298 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 RANBP1P43487 201 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 PRRX1P54821 245 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 RAG2P55895 527 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 MLLT11Q13015 90 aaPredicted RBP5.67□□□□□ -1.5
TOP3A-207ENST00000493648 TPBGQ13641 420 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 RBM39Q14498 530 aaKnown RBP5.67□□□□□ -1.5
TOP3A-207ENST00000493648 TAF9Q16594 264 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 LRRC75BQ2VPJ9 315 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 HSD17B12Q53GQ0 312 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 MINOS1Q5TGZ0 78 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 LIPKQ5VXJ0 399 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF626Q68DY1 528 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 AWAT2Q6E213 333 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 SLC35E4Q6ICL7 350 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 SHISA2Q6UWI4 295 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 HEPN1Q6WQI6 88 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 TCF23Q7RTU1 214 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 LHFPL4Q7Z7J7 247 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 RTN4RL2Q86UN3 420 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 ABHD12Q8N2K0 398 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 DTX3Q8N9I9 347 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 SUMF2Q8NBJ7 301 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF596Q8TC21 504 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 NEK7Q8TDX7 302 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 C17orf50Q8WW18 174 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 TMEM203Q969S6 136 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 COQ2Q96H96 371 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 AJUBAQ96IF1 538 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 MGLLQ99685 303 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 DPCDQ9BVM2 203 aaPredicted RBP5.67□□□□□ -1.5
TOP3A-207ENST00000493648 CLEC7AQ9BXN2 247 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 YTHDF1Q9BYJ9 559 aaKnown RBP5.67□□□□□ -1.5
TOP3A-207ENST00000493648 SPACA1Q9HBV2 294 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 ABCB10Q9NRK6 738 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 C1RLQ9NZP8 487 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 VPREB3Q9UKI3 123 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 MMP24Q9Y5R2 645 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 MINOS1-NBL1R4GNA1 71 aa5.67□□□□□ -1.5
TOP3A-207ENST00000493648 KBTBD11-OT1A0A1B0GTJ5 212 aa5.66□□□□□ -1.5
TOP3A-207ENST00000493648 TMEM30CPA0ZSE6 113 aa5.66□□□□□ -1.5
TOP3A-207ENST00000493648 CLPSL1A2RUU4 121 aa5.66□□□□□ -1.5
TOP3A-207ENST00000493648 FAM90A10PA6NDY2 464 aa5.66□□□□□ -1.5
TOP3A-207ENST00000493648 FAM90A18PA6NE21 464 aa5.66□□□□□ -1.5
TOP3A-207ENST00000493648 FAM90A16PA6NEW6 464 aa5.66□□□□□ -1.5
TOP3A-207ENST00000493648 FAM90A20PA6NIJ5 464 aa5.66□□□□□ -1.5
TOP3A-207ENST00000493648 FAM90A7PA6NKC0 464 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms