RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 ZNF880Q6PDB4 577 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 DPPA2Q7Z7J5 298 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 GGACTQ9BVM4 153 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 DOK5Q9P104 306 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 HSF4Q9ULV5 492 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 WSB1Q9Y6I7 421 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 PATE3B3GLJ2 98 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 EIF1BO60739 113 aaKnown RBP13.45□□□□□ -0.26
CACUL1-206ENST00000493518 TK1P04183 234 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 SMIM6P0DI80 62 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 BOD1Q96IK1 185 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 FOXB1Q99853 325 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 CALHM2Q9HA72 323 aa13.45□□□□□ -0.26
CACUL1-206ENST00000493518 POLEQ07864 2286 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 C5orf49A4QMS7 147 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 UBE2CO00762 179 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 SSR4P51571 173 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 ZXDAP98168 799 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 ZNF239Q16600 458 aaKnown RBP13.44□□□□□ -0.26
CACUL1-206ENST00000493518 HIST3H3Q16695 136 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 Q8WTZ3 238 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 TGIF2Q9GZN2 237 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 SMOC1Q9H4F8 434 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 PDCD6O75340 191 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 METTL15P1P0C7V9 234 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 SUCLG1P53597 346 aaKnown RBP13.44□□□□□ -0.26
CACUL1-206ENST00000493518 ERVFRD-1P60508 538 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 HOXA4Q00056 320 aaPredicted RBP13.44□□□□□ -0.26
CACUL1-206ENST00000493518 ARL6IP1Q15041 203 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 WDR74Q6RFH5 385 aaPredicted RBP13.44□□□□□ -0.26
CACUL1-206ENST00000493518 CCDC71LQ8N9Z2 235 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 ZNF383Q8NA42 475 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 KCNS2Q9ULS6 477 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 PPP1R3CQ9UQK1 317 aa13.44□□□□□ -0.26
CACUL1-206ENST00000493518 PROB1E7EW31 1015 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 FABP4P15090 132 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 HSPA12AO43301 675 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 LIFP15018 202 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 SELEP16581 610 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 TESK1Q15569 626 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 C3AR1Q16581 482 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 ZNF665Q9H7R5 613 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 ZMAT5Q9UDW3 170 aaKnown RBP13.43□□□□□ -0.26
CACUL1-206ENST00000493518 HS3ST3B1Q9Y662 390 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 FUT3P21217 361 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 GDF1P27539 372 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 GINS3Q9BRX5 216 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 VSIRQ9H7M9 311 aa13.43□□□□□ -0.26
CACUL1-206ENST00000493518 CXorf65A6NEN9 183 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 ARGFXA6NJG6 315 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 SOX15O60248 233 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 PYY3Q5JQD4 70 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 WDR25Q64LD2 544 aaPredicted RBP13.42□□□□□ -0.26
CACUL1-206ENST00000493518 ALKBH2Q6NS38 261 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 OR10D3Q8NH80 312 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 SPSB1Q96BD6 273 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 NIPSNAP3BQ9BS92 247 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 CHD3Q12873 2000 aaKnown RBP13.42□□□□□ -0.26
CACUL1-206ENST00000493518 NGFP01138 241 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 DEFA4P12838 97 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 H3F3AP84243 136 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 PCOLCEQ15113 449 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 RHEBQ15382 184 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 HMGN3Q15651 99 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 FAM27BQ5VT28 67 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 OR8G2PQ6IF36 304 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 IL22RA1Q8N6P7 574 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 ADPRHL1Q8NDY3 354 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 HPSE2Q8WWQ2 592 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 C18orf12Q96KH6 178 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 CHRNA10Q9GZZ6 450 aa13.42□□□□□ -0.26
CACUL1-206ENST00000493518 AURKAIP1Q9NWT8 199 aaPredicted RBP13.42□□□□□ -0.26
CACUL1-206ENST00000493518 SYNGR1O43759 233 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 NR2C1P13056 603 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 BEND4Q6ZU67 534 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 CPEB3Q8NE35 698 aaKnown RBP13.41□□□□□ -0.26
CACUL1-206ENST00000493518 PLPPR2Q96GM1 343 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 SNX22Q96L94 193 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 RNF122Q9H9V4 155 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 LRFN1Q9P244 771 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 POMT1Q9Y6A1 747 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 A0A0G2JRQ6 117 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 K7N7A8 449 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 SYNGR3O43761 229 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 WDR1O75083 606 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 SERPINE2P07093 398 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 ZNF266Q14584 549 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 SPINK9Q5DT21 86 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 SPINK14Q6IE38 97 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 OR2T2Q6IF00 324 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 MOB3AQ96BX8 217 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 TMEM38BQ9NVV0 291 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 ERRFI1Q9UJM3 462 aaPredicted RBP13.41□□□□□ -0.26
CACUL1-206ENST00000493518 RNF150Q9ULK6 438 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 ZNF732B4DXR9 585 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 SCAF4O95104 1147 aaKnown RBP13.41□□□□□ -0.26
CACUL1-206ENST00000493518 P04436 131 aa13.41□□□□□ -0.26
CACUL1-206ENST00000493518 CLDN15P56746 228 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms