RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 AARDQ4LEZ3 155 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 KLHL12Q53G59 568 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 PRR27Q6MZM9 219 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF620Q6ZNG0 422 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 CROCCP2Q86T23 111 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OAFQ86UD1 273 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 FAM219AQ8IW50 185 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 FAM216BQ8N7L0 139 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 UXS1Q8NBZ7 420 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR4F15Q8NGB8 312 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR8J3Q8NGG0 315 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR56B2PQ8NGI1 322 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR4C15Q8NGM1 316 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR6K6Q8NGW6 343 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 OR1F12Q8NHA8 337 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 MRAPQ8TCY5 172 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ACOT11Q8WXI4 607 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 HIST1H2ACQ93077 130 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 TMEM186Q96B77 213 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SLCO4A1Q96BD0 722 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 ZMYND19Q96E35 227 aaPredicted RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 C5orf30Q96GV9 206 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 CCT8L2Q96SF2 557 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 PAPOLGQ9BWT3 736 aaKnown RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 YTHDF1Q9BYJ9 559 aaKnown RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 NSRP1Q9H0G5 558 aaKnown RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 RAB1BQ9H0U4 201 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 C12orf10Q9HB07 376 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 FANCFQ9NPI8 374 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 PLEK2Q9NYT0 353 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SLC7A8Q9UHI5 535 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 PURGQ9UJV8 347 aaKnown RBP2.27□□□□□ -2.05
PTCD3-218ENST00000493430 COPS3Q9UNS2 423 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 B9D1Q9UPM9 204 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 SIGLEC9Q9Y336 463 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 GMEB1Q9Y692 573 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 COMMD3-BMI1R4GMX3 469 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 PKD1L1Q8TDX9 2849 aa2.27□□□□□ -2.05
PTCD3-218ENST00000493430 NOTCH1P46531 2555 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 LOC102725191A0A1B0GVB3 256 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SMIM30A4D0T7 59 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 CCDC182A6NF36 153 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 OR6C6A6NF89 314 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 BBIP1A8MTZ0 92 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 CLDN25C9JDP6 229 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 BHLHE40O14503 412 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ST8SIA3O43173 380 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 NOL3O60936 208 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 NDUFB2O95178 105 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 FARS2O95363 451 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SNAP29O95721 258 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 GYPAP02724 150 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 CST2P09228 141 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ACSM4P0C7M7 580 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SPI1P17947 270 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ACKR3P25106 362 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 POLR2IP36954 125 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 RBM34P42696 430 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 EVX1P49640 407 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 DAP3P51398 398 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF133P52736 654 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ST3GAL3Q11203 375 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 GAMTQ14353 236 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 GK2Q14410 553 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 Q1RN00 199 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 DEFB112Q30KQ8 113 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SLC36A3Q495N2 470 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 LINC01590Q5TEZ4 76 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 FAM27BQ5VT28 67 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF770Q6IQ21 691 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ACSM5Q6NUN0 579 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ERICH5Q6P6B1 374 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ARL9Q6T311 187 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 LRRN1Q6UXK5 716 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 TMEM182Q6ZP80 229 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 TMUB2Q71RG4 321 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SSX6Q7RTT6 188 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 DCXRQ7Z4W1 244 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ABHD12BQ7Z5M8 362 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 C5orf24Q7Z6I8 188 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ZDHHC21Q8IVQ6 265 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SLC30A8Q8IWU4 369 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 PGAM4Q8N0Y7 254 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF283Q8N7M2 679 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 PROKR2Q8NFJ6 384 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 OR6N2Q8NGY6 317 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ST7LQ8TDW4 575 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 RORBQ92753 470 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 RDH5Q92781 318 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 RPL3LQ92901 407 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 SLC35B4Q969S0 331 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ST6GALNAC6Q969X2 333 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 MOB3AQ96BX8 217 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 BSCL2Q96G97 398 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 NSMCE2Q96MF7 247 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 TBX15Q96SF7 602 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 TBX5Q99593 518 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 TMEM246Q9BRR3 403 aa2.26□□□□□ -2.05
PTCD3-218ENST00000493430 ADAT1Q9BUB4 502 aaKnown RBP2.26□□□□□ -2.05
PTCD3-218ENST00000493430 TSSK6Q9BXA6 273 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms