RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 ZNF44P15621 663 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 RPS2P15880 293 aaKnown RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 HLA-GP17693 338 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 HOXA5P20719 270 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 CD80P33681 288 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 CDX1P47902 265 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 NPBWR1P48145 328 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 POU3F4P49335 361 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 PAX2Q02962 417 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 HIST3H3Q16695 136 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 SPATA46Q5T0L3 261 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 THEM4Q5T1C6 240 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 C11orf87Q6NUJ2 197 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 ETV3LQ6ZN32 361 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 SLC16A14Q7RTX9 510 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 DCXRQ7Z4W1 244 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 NR2C2APQ86WQ0 139 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 ZFP82Q8N141 532 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 ZFP41Q8N8Y5 198 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 INO80EQ8NBZ0 244 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 BEND2Q8NDZ0 799 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 SLC25A44Q96H78 314 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 SLC25A21Q9BQT8 299 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF107Q9UII5 783 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-213ENST00000492506 TMED3Q9Y3Q3 217 aa10.99□□□□□ -0.65
HDAC3-213ENST00000492506 LOC100509620A0A075B734 347 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 IGHV3OR16-10A0A075B7F0 116 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 TRBV23-1A0A0A0MS06 115 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 A0A1B0GV90 55 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 MDFIC2A0A1B0GVS7 189 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 UNC119BA6NIH7 251 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 SLC22A31A6NKX4 558 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 SEC14L6B5MCN3 397 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 SURF4O15260 269 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 TCAPO15273 167 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 MT-ATP6P00846 226 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 UCHL1P09936 223 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 OR8U8P0C7N1 319 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 RELBQ01201 579 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 MELKQ14680 651 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 RHEBQ15382 184 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF718Q3SXZ3 478 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 TMEM155Q4W5P6 130 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 HIST2H3PS2Q5TEC6 136 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 MBNL2Q5VZF2 373 aaKnown RBP10.98□□□□□ -0.65
HDAC3-213ENST00000492506 OR10K2Q6IF99 312 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 IQCF1Q8N6M8 205 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 C10orf53Q8N6V4 93 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 KIR3DL3Q8N743 410 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 SLC25A40Q8TBP6 338 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 KLF14Q8TD94 323 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-213ENST00000492506 MCHR2Q969V1 340 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 POM121L2Q96KW2 1035 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 TEAD3Q99594 435 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 SYT4Q9H2B2 425 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 PRDM13Q9H4Q3 707 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 NRIP3Q9NQ35 241 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 FLVCR2Q9UPI3 526 aa10.98□□□□□ -0.65
HDAC3-213ENST00000492506 A0A1B0GTI1 187 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 A0A1B0GUS0 222 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 DAPL1A0PJW8 107 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 RBBP9O75884 186 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 GPANK1O95872 356 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 KNG1P01042 644 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 PPIAL4GP0DN37 164 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 RAB5AP20339 215 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 CRABP1P29762 137 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 DDTP30046 118 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 APLNRP35414 380 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 PPT1P50897 306 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 CAV2P51636 162 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 H2BFSP57053 126 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 KRTAP10-3P60369 221 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 PLP2Q04941 152 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF74Q16587 644 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 ACSM3Q53FZ2 586 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 RNASE10Q5GAN6 216 aaKnown RBP10.97□□□□□ -0.65
HDAC3-213ENST00000492506 C9orf152Q5JTZ5 239 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 DMKNQ6E0U4 476 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-213ENST00000492506 BCDIN3DQ7Z5W3 292 aaKnown RBP10.97□□□□□ -0.65
HDAC3-213ENST00000492506 LRRC18Q8N456 261 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 ZNF283Q8N7M2 679 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 OR56B1Q8NGI3 324 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 OR52E2Q8NGJ4 325 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 OR5M8Q8NGP6 311 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 OR52I2Q8NH67 350 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 OR5R1Q8NH85 324 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 NUDCD2Q8WVJ2 157 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 THRSPQ92748 146 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 SLAMF9Q96A28 289 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 MRPL13Q9BYD1 178 aaKnown RBP10.97□□□□□ -0.65
HDAC3-213ENST00000492506 OR2J1Q9GZK6 312 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 TLNRD1Q9H1K6 362 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 MSL2Q9HCI7 577 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 TMEM106BQ9NUM4 274 aa10.97□□□□□ -0.65
HDAC3-213ENST00000492506 GAR1Q9NY12 217 aaKnown RBP10.97□□□□□ -0.65
HDAC3-213ENST00000492506 RHCGQ9UBD6 479 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms