RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 GBX2P52951 348 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-211ENST00000491233 PRRX1P54821 245 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 TCTEX1D4Q5JR98 221 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 CENPVQ7Z7K6 275 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-211ENST00000491233 PXT1Q8NFP0 134 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 OR51A2Q8NGJ7 313 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 OR51T1Q8NGJ9 327 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 OR52I1Q8NGK6 324 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 OR5D14Q8NGL3 314 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 OR13A1Q8NGR1 328 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 OR9G1Q8NH87 305 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 TNFAIP8L1Q8WVP5 186 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 RGP1Q92546 391 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-211ENST00000491233 TOMM40LQ969M1 308 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 Q96MT0 163 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 NR1H4Q96RI1 486 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-211ENST00000491233 C9orf16Q9BUW7 83 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 FAM192AQ9GZU8 254 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 TAS2R4Q9NYW5 299 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 CALYQ9NYX4 217 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-211ENST00000491233 KIF25Q9UIL4 384 aa10.88□□□□□ -0.67
COL6A3-211ENST00000491233 MEIKINA0A087WXM9 373 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 TRAV24A0A0B4J272 114 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 KBTBD11-OT1A0A1B0GTJ5 212 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 TCRBV4S1A1TA0A5B7 111 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 OOSP1A8MZH6 123 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 LY6LH3BQJ8 138 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 AMY1AP04745 511 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 AMY2AP04746 511 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 RPSAP08865 295 aaKnown RBP10.87□□□□□ -0.67
COL6A3-211ENST00000491233 IGLL1P15814 213 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 RAB3AP20336 220 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 MNDAP41218 407 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 SOX2P48431 317 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 RAB40BQ12829 278 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 IL13RA2Q14627 380 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 C9orf152Q5JTZ5 239 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 ELP2Q6IA86 826 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 CCDC144NLQ6NUI1 221 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 SATL1Q86VE3 508 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 OR4X2Q8NGF9 303 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 OR10K1Q8NGX5 313 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 RHOXF1Q8NHV9 184 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 APH1BQ8WW43 257 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 MYDGFQ969H8 173 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 RPEQ96AT9 228 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 CPNE2Q96FN4 548 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-211ENST00000491233 GPER1Q99527 375 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 SLC29A1Q99808 456 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 JAM3Q9BX67 310 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 MOB4Q9Y3A3 225 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 HSPE1-MOB4S4R3N1 261 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 NOTCH3Q9UM47 2321 aa10.87□□□□□ -0.67
COL6A3-211ENST00000491233 IL1AP01583 271 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 IGHV3-7P01780 117 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 PF4P02776 101 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 CGB3P0DN86 165 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 CGB7P0DN87 165 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 GTF2A1P52655 376 aaPredicted RBP10.86□□□□□ -0.67
COL6A3-211ENST00000491233 LOXL3P58215 753 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 LTC4SQ16873 150 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 PIGYQ3MUY2 71 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
COL6A3-211ENST00000491233 FOXB2Q5VYV0 432 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 ZNF529Q6P280 563 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 OR56B4Q8NH76 319 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 CNIH3Q8TBE1 160 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 PLPPR1Q8TBJ4 325 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 LEAP2Q969E1 77 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 IDI2-AS1Q9NZ38 188 aa10.86□□□□□ -0.67
COL6A3-211ENST00000491233 RPL36Q9Y3U8 105 aaKnown RBP10.86□□□□□ -0.67
COL6A3-211ENST00000491233 AMMECR1Q9Y4X0 333 aaPredicted RBP10.86□□□□□ -0.67
COL6A3-211ENST00000491233 TSSC4Q9Y5U2 329 aaPredicted RBP10.86□□□□□ -0.67
COL6A3-211ENST00000491233 DNAH3Q8TD57 4116 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 LOC100130705A0A1B0GUX0 176 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 A0A1W2PPI3 338 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 J3QR06 171 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 M0QZK8 103 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 MAGEB3O15480 346 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 HTR3BO95264 441 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 SNRNP70P08621 437 aaKnown RBP10.85□□□□□ -0.67
COL6A3-211ENST00000491233 LIMS3P0CW19 117 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 LIMS4P0CW20 117 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 SSTR5P35346 364 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 GNG10P50151 68 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 RSU1Q15404 277 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 XAF1Q6GPH4 301 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 PQLC1Q8N2U9 271 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 ZNF565Q8N9K5 539 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 WFDC9Q8NEX5 89 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 HAVCR2Q8TDQ0 301 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 MRGPRDQ8TDS7 321 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 BARHL1Q9BZE3 327 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 NCOR1P1Q9H4R4 102 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 PCDHB16Q9NRJ7 776 aa10.85□□□□□ -0.67
COL6A3-211ENST00000491233 MRPS18AQ9NVS2 196 aaKnown RBP10.85□□□□□ -0.67
COL6A3-211ENST00000491233 TRAV39A0A0B4J263 110 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 346.9 ms