RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RBMXL1Q96E39 390 aaKnown RBP6.34□□□□□ -1.39
NPHP3-208ENST00000490993 POMT1Q9Y6A1 747 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 IGKV1-9A0A0C4DH69 117 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 PINLYPA6NC86 204 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 SSX5O60225 188 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 CEACAM1P13688 526 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 LTC4SQ16873 150 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 Q6ZT83 130 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 STPG2Q8N412 459 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 LRRC29Q8WV35 223 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 BCL2L2Q92843 193 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-208ENST00000490993 ZNF837Q96EG3 531 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-208ENST00000490993 ABHD14BQ96IU4 210 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 OR2J1Q9GZK6 312 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 TP53TG5Q9Y2B4 290 aa6.34□□□□□ -1.39
NPHP3-208ENST00000490993 CDIPTO14735 213 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 ADAM20O43506 726 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 PMP22Q01453 160 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 TAGLNQ01995 201 aaKnown RBP6.34□□□□□ -1.4
NPHP3-208ENST00000490993 BAXQ07812 192 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 PLA2G2CQ5R387 149 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 LAMTOR1Q6IAA8 161 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 CISD2Q8N5K1 135 aaKnown RBP6.34□□□□□ -1.4
NPHP3-208ENST00000490993 ADGRG7Q96K78 797 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 RPS10P5Q9NQ39 176 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 PSENENQ9NZ42 101 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 COQ3Q9NZJ6 369 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF319Q9P2F9 582 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM131Q92545 1883 aa6.34□□□□□ -1.4
NPHP3-208ENST00000490993 H2AFB1P0C5Y9 115 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 ACKR3P25106 362 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 S100PP25815 95 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 OTX1P32242 354 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 KIR2DS2P43631 304 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM50BP56557 158 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 ATP1A1-AS1Q5TC04 95 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 DBX2Q6ZNG2 339 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 C1QL2Q7Z5L3 287 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 WFDC8Q8IUA0 241 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 SOX7Q9BT81 388 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 NKX6-2Q9C056 277 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 A0A1B0GV50 99 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 SS18L1O75177 396 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF735P0CB33 412 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 RAB7AP51149 207 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 TSC22D1Q15714 1073 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM182Q6ZP80 229 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 OR2C3Q8N628 320 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF610Q8N9Z0 462 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 LILRB1Q8NHL6 650 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 MRPL24Q96A35 216 aaKnown RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 HINT2Q9BX68 163 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 PIPOXQ9P0Z9 390 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 TRGV10A0A0A0MS01 117 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 MMP9P14780 707 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 HLA-GP17693 338 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 HOXA1P49639 335 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 PPT1P50897 306 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF529Q6P280 563 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 GAPTQ8N292 157 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 FDCSPQ8NFU4 85 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 OR8U1Q8NH10 309 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 MARVELD3Q96A59 401 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 Q9N2K0 584 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 MED9Q9NWA0 146 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 NDRG3Q9UGV2 375 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 hCG_1809904A0A1W2PP81 198 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 A0A1W2PPE2 198 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 A0A1W2PR64 198 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 A0A1W2PRV1 198 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 CDX4O14627 284 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-208ENST00000490993 MBP02144 154 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 PJVKQ0ZLH3 352 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 OR8G5Q8NG78 346 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 PROK2Q9HC23 129 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 PLSCR2Q9NRY7 297 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 OR6C3Q9NZP0 311 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 FBXL17Q9UF56 701 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 TINAGQ9UJW2 476 aa6.33□□□□□ -1.4
NPHP3-208ENST00000490993 IGHV3-64DA0A0J9YX35 117 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 A0A1B0GU03 582 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 PQLC2LA1A4F0 135 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 TRIM77I1YAP6 450 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 ACTL6BO94805 426 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 DKK1O94907 266 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 AGFG2O95081 481 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM33P57088 247 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 TAS2R30P59541 319 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 QRFPP83859 136 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF808Q8N4W9 903 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 MDS2Q8NDY4 140 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 ADAMTS17Q8TE56 1095 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 S1PR3Q99500 378 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SLC39A9Q9NUM3 307 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 PURGQ9UJV8 347 aaKnown RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 A0A1W2PPV4 95 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 C1orf196B1AJZ1 125 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SLC33A1O00400 549 aaPredicted RBP6.32□□□□□ -1.4
NPHP3-208ENST00000490993 SPRY3O43610 288 aa6.32□□□□□ -1.4
NPHP3-208ENST00000490993 IFNA10P01566 189 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms