RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ALKAL2Q6UX46 152 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 ERGIC1Q969X5 290 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 VKORC1Q9BQB6 163 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZNF649Q9BS31 505 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 SLC35D1Q9NTN3 355 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 SERTAD4Q9NUC0 356 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 CACFD1Q9UGQ2 172 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 DTYMKP23919 212 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 LYG2Q86SG7 212 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 RBM38Q9H0Z9 239 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 M0QZ24 198 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 CD40P25942 277 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 LPAR6P43657 344 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 SLC25A53Q5H9E4 307 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 TMEM56Q96MV1 263 aa12.45□□□□□ -0.42
ARHGEF39-205ENST00000490638 A0A0U1RQK1 487 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 CLEC18AA5D8T8 446 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 B9A039 149 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 MGST3O14880 152 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 TMEM11P17152 192 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 CADM3Q8N126 398 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 PRDM14Q9GZV8 571 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 RAB4BP61018 213 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 Q0VFX4 171 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 NANPQ8TBE9 248 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZNF837Q96EG3 531 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 MLXQ9UH92 298 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 TRDCB7Z8K6 153 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZNF385CQ66K41 422 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 RNASE6Q93091 150 aaKnown RBP12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 ARPC5LQ9BPX5 153 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZNF426Q9BUY5 554 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 ARV1Q9H2C2 271 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 C1RLQ9NZP8 487 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 CSAG2Q9Y5P2 127 aa12.44□□□□□ -0.42
ARHGEF39-205ENST00000490638 LY6G6EA0A0G2JKS1 128 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 FPR2P25090 351 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 PMELP40967 661 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 CMTM2Q8TAZ6 248 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 TMEM54Q969K7 222 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 ADTRPQ96IZ2 230 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 MS4A7Q9GZW8 240 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 AK3Q9UIJ7 227 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 U3KQA8 63 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 FANCMQ8IYD8 2048 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 CEP295Q9C0D2 2601 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 OR5H14A6NHG9 310 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 POM121CA8CG34 1229 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 CRYZL1O95825 349 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 ELLP55199 621 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 PEAR1Q5VY43 1037 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 SUMF2Q8NBJ7 301 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 LILRB4Q8NHJ6 448 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 TIMM8BQ9Y5J9 83 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 IGLV3-32A0A0A0MS00 114 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 ARPC4-TTLL3A0A0A6YYG9 625 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 A0A1W2PP11 408 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 F8W036 122 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 IL5P05113 134 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 OR13D1Q8NGV5 346 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 CORO2AQ92828 525 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 DAZAP1Q96EP5 407 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 AKIP1Q9NQ31 210 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 NLRC5Q86WI3 1866 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 MKI67P46013 3256 aaKnown RBP12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 DOCK10Q96BY6 2186 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 SEMA7AO75326 666 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 OPN1MWP04001 364 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 OPN1MW2P0DN77 364 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 OPN1MW3P0DN78 364 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 COL10A1Q03692 680 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 OR52B4Q8NGK2 314 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 OR14K1Q8NGZ2 314 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 MOB3AQ96BX8 217 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 C2orf50Q96LR7 162 aa12.43□□□□□ -0.42
ARHGEF39-205ENST00000490638 PIEZO2Q9H5I5 2752 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 NKX2-6A6NCS4 301 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 NUDT19A8MXV4 375 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 SMLR1H3BR10 107 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 IGHV1-2P23083 117 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 S100A11P31949 105 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 UBA52P62987 128 aaKnown RBP12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 TLE4Q04727 773 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 ZBTB37Q5TC79 503 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 C1orf162Q8NEQ5 155 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 BORCS7Q96B45 105 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 ACY3Q96HD9 319 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 WDFY2Q96P53 400 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 PSENENQ9NZ42 101 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 SPRR3Q9UBC9 169 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 IGKV1D-43A0A0B4J1Z2 117 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 CRYM-AS1A6NIL9 109 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 SYNGR1O43759 233 aa12.42□□□□□ -0.42
ARHGEF39-205ENST00000490638 SMPD2O60906 423 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms