RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 EXTL1Q92935 676 aa11.37□□□□□ -0.59
TNXB-206ENST00000490077 HSF4Q9ULV5 492 aa11.37□□□□□ -0.59
TNXB-206ENST00000490077 MMP24Q9Y5R2 645 aa11.37□□□□□ -0.59
TNXB-206ENST00000490077 LIPGQ9Y5X9 500 aa11.37□□□□□ -0.59
TNXB-206ENST00000490077 PLCE1Q9P212 2302 aa11.37□□□□□ -0.59
TNXB-206ENST00000490077 KIAA1324LA8MWY0 1029 aaPredicted RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 NTN3O00634 580 aaPredicted RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 TSPAN15O95858 294 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 CELA3BP08861 270 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 MDKP21741 143 aaPredicted RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 SNCAP37840 140 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 FOLR3P41439 243 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 RBM11P57052 281 aaKnown RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 ADAM5Q6NVV9 412 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 NUFIP2Q7Z417 695 aaKnown RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 OR1K1Q8NGR3 316 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 NEK7Q8TDX7 302 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 IL1F10Q8WWZ1 152 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 THOC3Q96J01 351 aaKnown RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 FAM86C1Q9NVL1 165 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 OR1A1Q9P1Q5 309 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 MAP1AP78559 2803 aaPredicted RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 PKDREJQ9NTG1 2253 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 TRBV23-1A0A0A0MS06 115 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 CAMLGP49069 296 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 FLI1Q01543 452 aaPredicted RBP11.36□□□□□ -0.59
TNXB-206ENST00000490077 TMEM42Q69YG0 159 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 FAM180AQ6UWF9 173 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 CCDC36Q8IYA8 594 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 NDRG3Q9UGV2 375 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 IL17BQ9UHF5 180 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 PRSS50Q9UI38 385 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 ZNF175Q9Y473 711 aa11.36□□□□□ -0.59
TNXB-206ENST00000490077 C9J4A7 227 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 H0YL77 283 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 SNAPINO95295 136 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 ZNF133P52736 654 aaPredicted RBP11.35□□□□□ -0.59
TNXB-206ENST00000490077 EWSR1Q01844 656 aaKnown RBP eCLIP11.35□□□□□ -0.59
TNXB-206ENST00000490077 SRSF6Q13247 344 aaKnown RBP11.35□□□□□ -0.59
TNXB-206ENST00000490077 RAB11FIP2Q7L804 512 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 ZNF295-AS1Q8N0V1 137 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 OR2V1Q8NHB1 315 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 DECR2Q9NUI1 292 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 ZNF732B4DXR9 585 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 MPPED1O15442 326 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 IFNA21P01568 189 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 PRDX4Q13162 271 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 NCMAPQ5T1S8 102 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 SPAG16Q8N0X2 631 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 SFT2D1Q8WV19 159 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 LRFN1Q9P244 771 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 HEATR1Q9H583 2144 aaKnown RBP11.35□□□□□ -0.59
TNXB-206ENST00000490077 ZNF292O60281 2723 aa11.35□□□□□ -0.59
TNXB-206ENST00000490077 PTPRZ1P23471 2315 aaPredicted RBP11.35□□□□□ -0.59
TNXB-206ENST00000490077 PDCD6O75340 191 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 NEURL1O76050 574 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 ATP6V0CP27449 155 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 TMEM267Q0VDI3 215 aaPredicted RBP11.34□□□□□ -0.59
TNXB-206ENST00000490077 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 TMPRSS7Q7RTY8 843 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 PLPPR2Q96GM1 343 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 WDR54Q9H977 334 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 DNAJB11Q9UBS4 358 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 TIMM10BQ9Y5J6 103 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 C3orf85A0A1B0GTC6 90 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 SLC22A20A6NK97 555 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 HMGB3O15347 200 aaKnown RBP11.34□□□□□ -0.59
TNXB-206ENST00000490077 RRP8O43159 456 aaKnown RBP11.34□□□□□ -0.59
TNXB-206ENST00000490077 CST2P09228 141 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 DANCRP0C864 163 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 NQO2P16083 231 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 GFRA1P56159 465 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 IL11RAQ14626 422 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 SWI5Q1ZZU3 235 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 AVPI1Q5T686 147 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 OR2T2Q6IF00 324 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 IL34Q6ZMJ4 242 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 CXorf67Q86X51 503 aaPredicted RBP11.34□□□□□ -0.59
TNXB-206ENST00000490077 PLPPR1Q8TBJ4 325 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 MOB3AQ96BX8 217 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 C19orf12Q9NSK7 152 aa11.34□□□□□ -0.59
TNXB-206ENST00000490077 A0A1B0GW55 424 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 H7C1Q1 480 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 TXNL1O43396 289 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.59
TNXB-206ENST00000490077 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 DYNLT3P51808 116 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 OR2B11Q5JQS5 317 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 BCO1Q9HAY6 547 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 DUX4Q9UBX2 424 aa11.33□□□□□ -0.59
TNXB-206ENST00000490077 SLC7A11Q9UPY5 501 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms