RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 OR2V2Q96R30 315 aa16.32■□□□□ 0.2
CCM2-216ENST00000488727 FGF23Q9GZV9 251 aaPredicted RBP16.32■□□□□ 0.2
CCM2-216ENST00000488727 PRRC2AP48634 2157 aaKnown RBP16.32■□□□□ 0.2
CCM2-216ENST00000488727 IGHV3-64DA0A0J9YX35 117 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 CEACAM18A8MTB9 384 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 IFNA6P05013 189 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 EXOSC2Q13868 293 aaKnown RBP16.31■□□□□ 0.2
CCM2-216ENST00000488727 CNN3Q15417 329 aaKnown RBP16.31■□□□□ 0.2
CCM2-216ENST00000488727 C11orf88Q6PI97 169 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 HOGA1Q86XE5 327 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 OR51T1Q8NGJ9 327 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 OR5M8Q8NGP6 311 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 NPRL2Q8WTW4 380 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 ITLN1Q8WWA0 313 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 HPSE2Q8WWQ2 592 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 ST8SIA4Q92187 359 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 SAP30LQ9HAJ7 183 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 DECR2Q9NUI1 292 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 IL19Q9UHD0 177 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 UBQLN2Q9UHD9 624 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 MPC1Q9Y5U8 109 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 AUP1Q9Y679 476 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 SERPINE3A8MV23 424 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 TPD52L2O43399 206 aaKnown RBP16.31■□□□□ 0.2
CCM2-216ENST00000488727 PRKACBP22694 351 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 CPT2P23786 658 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 CD34P28906 385 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 RBMXP38159 391 aaKnown RBP16.31■□□□□ 0.2
CCM2-216ENST00000488727 GMFBP60983 142 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 MICBQ29980 383 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 TGIF2LYQ8IUE0 185 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 KRTAP1-3Q8IUG1 177 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 MEGF10Q96KG7 1140 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 S100A13Q99584 98 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 FOXC2Q99958 501 aa16.31■□□□□ 0.2
CCM2-216ENST00000488727 DYSFO75923 2080 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 OR2AT4A6NND4 320 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 LYNX1G3V0Z9 82 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 NOS1APO75052 506 aaPredicted RBP16.3■□□□□ 0.2
CCM2-216ENST00000488727 HLA-AP01891 365 aaKnown RBP16.3■□□□□ 0.2
CCM2-216ENST00000488727 LYNX1P0DP58 116 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 DAOP14920 347 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 TNFSF4P23510 183 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 TAS2R31P59538 309 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 CLLU1Q5K131 121 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 C17orf107Q6ZR85 190 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 WDR86Q86TI4 376 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 ZDHHC23Q8IYP9 409 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 ZNF525Q8N782 197 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 OR5D18Q8NGL1 313 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 OR5P3Q8WZ94 311 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 PECRQ9BY49 303 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 BARX1Q9HBU1 254 aaPredicted RBP16.3■□□□□ 0.2
CCM2-216ENST00000488727 GPR173Q9NS66 373 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 NOP16Q9Y3C1 178 aaKnown RBP16.3■□□□□ 0.2
CCM2-216ENST00000488727 MAB21L2Q9Y586 359 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 VPS13CQ709C8 3753 aa16.3■□□□□ 0.2
CCM2-216ENST00000488727 RPS10-NUDT3A0A1W2PQS6 291 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 RFPL4AA6NLU0 287 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 RFPL4AL1F8VTS6 287 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 NRASP01111 189 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 PMP2P02689 132 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 CD200P41217 278 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 TESK1Q15569 626 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 MITD1Q8WV92 249 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 EGLN1Q9GZT9 426 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 CXXC4Q9H2H0 198 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 TEX15Q9BXT5 2789 aa16.29■□□□□ 0.2
CCM2-216ENST00000488727 MAP1AP78559 2803 aaPredicted RBP16.29■□□□□ 0.2
CCM2-216ENST00000488727 MYO9AB2RTY4 2548 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 C9orf170A2RU37 121 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 SERPINA2P20848 420 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 COL8A2P25067 703 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 PPP1R1AQ13522 171 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 ARFRP1Q13795 201 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 Q5PR19 223 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 PRAMEF6Q5VXH4 476 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 PLCXD3Q63HM9 321 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 ASCL4Q6XD76 172 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 LHFPL2Q6ZUX7 228 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 MOB3CQ70IA8 216 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 TERB2Q8NHR7 220 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 TREM2Q9NZC2 230 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 AKAP9Q99996 3911 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 IGHV1-69-2A0A0G2JMI3 117 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.28■□□□□ 0.2
CCM2-216ENST00000488727 PTBP3O95758 552 aaKnown RBP16.28■□□□□ 0.2
CCM2-216ENST00000488727 RPA2P15927 270 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 BLVRBP30043 206 aaPredicted RBP16.28■□□□□ 0.2
CCM2-216ENST00000488727 S100A11P31949 105 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 TAS2R46P59540 309 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 FGL1Q08830 312 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 CEACAM21Q3KPI0 293 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 OR8H3Q8N146 312 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 SPERTQ8NA61 448 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 Q96M66 194 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 TECTBQ96PL2 329 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 METTL9Q9H1A3 318 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 FN3KRPQ9HA64 309 aa16.28■□□□□ 0.2
CCM2-216ENST00000488727 GCM1Q9NP62 436 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms