RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 GLIPR1P48060 266 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 PSMD7P51665 324 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 EFNB2P52799 333 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 VBP1P61758 197 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 KLRD1Q13241 179 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 KRBOX4Q5JUW0 171 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 GPR107Q5VW38 600 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 RAB12Q6IQ22 244 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 GDPGP1Q6ZNW5 385 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 OR2W3Q7Z3T1 314 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 TRAPPC6BQ86SZ2 158 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 TPRA1Q86W33 373 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 PDZD9Q8IXQ8 264 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 KIR3DL3Q8N743 410 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 Q8N7P7 452 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 OR5D13Q8NGL4 314 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 LGALS14Q8TCE9 139 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 MRPS24Q96EL2 167 aaKnown RBP9.08□□□□□ -0.96
UBE4B-210ENST00000488228 LPAR5Q9H1C0 372 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 DAPK2Q9UIK4 370 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 KIF25Q9UIL4 384 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 KPTNQ9Y664 436 aa9.08□□□□□ -0.96
UBE4B-210ENST00000488228 TRAV39A0A0B4J263 110 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 ODAMA1E959 279 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A10PA6NDY2 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A18PA6NE21 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A16PA6NEW6 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A20PA6NIJ5 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A8PA6NJQ4 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A7PA6NKC0 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A22PA8MWA6 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A12PA8MX19 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A5PA8MXJ8 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A23PA8MXZ1 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 LDLRAD4O15165 306 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 PDCD6O75340 191 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A15PP0C7V4 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A13PP0C7W8 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A14PP0C7W9 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 FAM90A24PP0C7X0 464 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 SNRPBP14678 240 aaKnown RBP9.07□□□□□ -0.96
UBE4B-210ENST00000488228 HOXB4P17483 251 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-210ENST00000488228 CHATP28329 748 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 GLP1RP43220 463 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 SERPINB10P48595 397 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 DLX6P56179 175 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 ERVFRD-1P60508 538 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 RSBN1Q5VWQ0 802 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-210ENST00000488228 RUSC1-AS1Q66K80 236 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 BRD3OSQ6XYD6 125 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 ZNF782Q6ZMW2 699 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-210ENST00000488228 CMTM4Q8IZR5 234 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 C22orf15Q8WYQ4 148 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 POM121Q96HA1 1249 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 TM2D1Q9BX74 207 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 SCOCQ9UIL1 159 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 LINC00312Q9Y6C7 94 aa9.07□□□□□ -0.96
UBE4B-210ENST00000488228 MEIKINA0A087WXM9 373 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 hADV38S2A0JD32 116 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 UBE2QL1A1L167 161 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 M0R1W7 72 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 SOCS1O15524 211 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 FAM157CP0CG43 387 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 EPHA1P21709 976 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 ERP29P30040 261 aaKnown RBP9.06□□□□□ -0.96
UBE4B-210ENST00000488228 MEF2CQ06413 473 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-210ENST00000488228 CTF1Q16619 201 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 C2orf76Q3KRA6 126 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 IDNKQ5T6J7 187 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 PRAMEF5Q5TYX0 476 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 C6orf201Q7Z4U5 140 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 ANKRD13BQ86YJ7 626 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 CLVS1Q8IUQ0 354 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-210ENST00000488228 PNKDQ8N490 385 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 OR13A1Q8NGR1 328 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 NDNFQ8TB73 568 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 NANPQ8TBE9 248 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 LHX4Q969G2 390 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 ZNF714Q96N38 554 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 SULT4A1Q9BR01 284 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 URM1Q9BTM9 101 aaKnown RBP9.06□□□□□ -0.96
UBE4B-210ENST00000488228 SPACA1Q9HBV2 294 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 FBLN5Q9UBX5 448 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 PEX16Q9Y5Y5 336 aa9.06□□□□□ -0.96
UBE4B-210ENST00000488228 SOX21Q9Y651 276 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-210ENST00000488228 TRGV10A0A0A0MS01 117 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 A0A1W2PPH5 198 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 A0A1W2PRD5 423 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 A0A1W2PRF3 423 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 A0A1W2PRM7 423 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 TMEM30CPA0ZSE6 113 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 FOXI3A8MTJ6 420 aaPredicted RBP9.05□□□□□ -0.96
UBE4B-210ENST00000488228 RNASEK-C17orf49H0YIS7 233 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 CLPXO76031 633 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 PAHP00439 452 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 ZNF728P0DKX0 622 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 FUT3P21217 361 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 COX7A1P24310 79 aa9.05□□□□□ -0.96
UBE4B-210ENST00000488228 BLVRBP30043 206 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms