RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 MAP2K4P45985 399 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 SNU13P55769 128 aaKnown RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 ARF6P62330 175 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 PRB3Q04118 309 aaPredicted RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 ACSM1Q08AH1 577 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 HABP2Q14520 560 aaPredicted RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 INSL4Q14641 139 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 SPHARQ15513 63 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 KISS1Q15726 138 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 KRTAP24-1Q3LI83 254 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 Q499Y3 187 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 YIF1BQ5BJH7 314 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 FAM58AQ8N1B3 248 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 TEX29Q8N6K0 151 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 Q8N7P7 452 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 PNLDC1Q8NA58 520 aaKnown RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 TMEM185AQ8NFB2 350 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 OR5D14Q8NGL3 314 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 H1FXQ92522 213 aaKnown RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 EMG1Q92979 244 aaKnown RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 MED30Q96HR3 178 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 ZNF48Q96MX3 618 aaPredicted RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 WDFY2Q96P53 400 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 DERL3Q96Q80 235 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 ZNF184Q99676 751 aaPredicted RBP5.28□□□□□ -1.56
SEC22C-215ENST00000487701 PCGF1Q9BSM1 259 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 ESM1Q9NQ30 184 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 C19orf12Q9NSK7 152 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 SCN3BQ9NY72 215 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 ETAA1Q9NY74 926 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 NUP50Q9UKX7 468 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 ERGIC3Q9Y282 383 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 TPRKBQ9Y3C4 175 aa5.28□□□□□ -1.56
SEC22C-215ENST00000487701 MDFIC2A0A1B0GVS7 189 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 A0A1W2PPK0 400 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 LINC00473A8K010 186 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 H3BUI4 141 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 K7N7A8 449 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 DENRO43583 198 aaKnown RBP5.27□□□□□ -1.57
SEC22C-215ENST00000487701 GPX5O75715 221 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 HAND1O96004 215 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 TK1P04183 234 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 ALDOBP05062 364 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 CD2P06729 351 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 LIPFP07098 398 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 OCMP0CE72 109 aaPredicted RBP5.27□□□□□ -1.57
SEC22C-215ENST00000487701 TMEM225BP0DP42 221 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 PF4V1P10720 104 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 PRKACAP17612 351 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 RAB3AP20336 220 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 DUSP1P28562 367 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 OR3A4PP47883 348 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 CAPZA1P52907 286 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 BDH1Q02338 343 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 ZNF146Q15072 292 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 RBM48Q5RL73 367 aaKnown RBP5.27□□□□□ -1.57
SEC22C-215ENST00000487701 FAM27D1Q5T7N8 215 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 DDI2Q5TDH0 399 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 METTL11BQ5VVY1 283 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 RUSC1-AS1Q66K80 236 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 BRD3OSQ6XYD6 125 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 C17orf107Q6ZR85 190 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 C9orf139Q6ZV77 190 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 TCF23Q7RTU1 214 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 PRSS48Q7RTY5 328 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 VMO1Q7Z5L0 202 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 MKXQ8IYA7 352 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 Q8IYB0 196 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 SAXO1Q8IYX7 474 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 PRR18Q8N4B5 295 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 ZNF561Q8N587 486 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 KIR3DL3Q8N743 410 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 ASCC1Q8N9N2 400 aaKnown RBP5.27□□□□□ -1.57
SEC22C-215ENST00000487701 ZSCAN4Q8NAM6 433 aaPredicted RBP5.27□□□□□ -1.57
SEC22C-215ENST00000487701 OR4M1Q8NGD0 313 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 TNFRSF14Q92956 283 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 C1orf147Q96MC9 270 aaPredicted RBP5.27□□□□□ -1.57
SEC22C-215ENST00000487701 NEK6Q9HC98 313 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 HMG20AQ9NP66 347 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 ZNF581Q9P0T4 197 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 ONECUT1Q9UBC0 465 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 KPTNQ9Y664 436 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
SEC22C-215ENST00000487701 CENPVL3A0A0U1RRI6 287 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 A0A1W2PQ09 198 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 MEX3AA1L020 520 aaKnown RBP5.26□□□□□ -1.57
SEC22C-215ENST00000487701 PRSS29PA6NIE9 313 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 RNASEK-C17orf49H0YIS7 233 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 TCF21O43680 179 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 SC5DO75845 299 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 CDRT1O95170 752 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 CYB5AP00167 134 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 CCL3L1P16619 93 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 BDKRB2P30411 391 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 OR3A1P47881 315 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 DLX6P56179 175 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 HILS1P60008 231 aa5.26□□□□□ -1.57
SEC22C-215ENST00000487701 RPS25P62851 125 aaKnown RBP5.26□□□□□ -1.57
SEC22C-215ENST00000487701 RPL31P62899 125 aaKnown RBP5.26□□□□□ -1.57
SEC22C-215ENST00000487701 PPP3R1P63098 170 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms