RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CEP78Q5JTW2 689 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 SFXN4Q6P4A7 337 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 RDH10Q8IZV5 341 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 RPP25LQ8N5L8 163 aaKnown RBP9.2□□□□□ -0.94
TRIM56-204ENST00000487252 OR51L1Q8NGJ5 315 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 OR5M8Q8NGP6 311 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 OR2T4Q8NH00 348 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 FOXRED1Q96CU9 486 aaPredicted RBP9.2□□□□□ -0.94
TRIM56-204ENST00000487252 SEH1LQ96EE3 360 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 DUX3Q96PT4 197 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 NEDD4LQ96PU5 975 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 RBP7Q96R05 134 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 KCNJ15Q99712 375 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 TXNIPQ9H3M7 391 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 RPRD1BQ9NQG5 326 aaKnown RBP9.2□□□□□ -0.94
TRIM56-204ENST00000487252 GRHPRQ9UBQ7 328 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 A0A1W2PPL8 197 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 NOTOA8MTQ0 251 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 MAGEB4O15481 346 aaPredicted RBP9.19□□□□□ -0.94
TRIM56-204ENST00000487252 RENP00797 406 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 AMY1AP04745 511 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 AMY2AP04746 511 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 LPLP06858 475 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 TRAPPC2P0DI81 140 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 TRAPPC2BP0DI82 140 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 CENPAP49450 140 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 KRTAP27-1Q3LI81 207 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 IDNKQ5T6J7 187 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 FAM27D1Q5T7N8 215 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 ZNF788Q6ZQV5 615 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 C16orf82Q7Z2V1 217 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 ZBTB8BQ8NAP8 495 aaPredicted RBP9.19□□□□□ -0.94
TRIM56-204ENST00000487252 ZNF511Q8NB15 262 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 KLHL30-AS1Q8NEE0 82 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 CMTM3Q96MX0 182 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 ADAT1Q9BUB4 502 aaKnown RBP9.19□□□□□ -0.94
TRIM56-204ENST00000487252 C11orf54Q9H0W9 315 aaPredicted RBP9.19□□□□□ -0.94
TRIM56-204ENST00000487252 VSX1Q9NZR4 365 aaPredicted RBP9.19□□□□□ -0.94
TRIM56-204ENST00000487252 ABRACLQ9P1F3 81 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 SLC25A10Q9UBX3 287 aaPredicted RBP9.19□□□□□ -0.94
TRIM56-204ENST00000487252 GNG8Q9UK08 70 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 KLHDC2Q9Y2U9 406 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 TBL2Q9Y4P3 447 aaKnown RBP9.19□□□□□ -0.94
TRIM56-204ENST00000487252 VPS13DQ5THJ4 4388 aa9.19□□□□□ -0.94
TRIM56-204ENST00000487252 TRBV2A0A0J9YWF9 115 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 TRBV5-5A0A0J9YX44 114 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 hCG_1807616A0A1W2PRN6 198 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 ODF3BA8MYP8 253 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 DCTN6O00399 190 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 LY86O95711 162 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 RAB3BP20337 219 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 INSL3P51460 131 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 BLVRAP53004 296 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 RPL27P61353 136 aaKnown RBP9.18□□□□□ -0.94
TRIM56-204ENST00000487252 P2RY14Q15391 338 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 SSX2Q16385 188 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 YIF1BQ5BJH7 314 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 HACD4Q5VWC8 232 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 FDX2Q6P4F2 183 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 LYPD4Q6UWN0 246 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 AKAP14Q86UN6 197 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 ZNF695Q8IW36 515 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 OR6V1Q8N148 313 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 Q8N402 240 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 OR13C5Q8NGS8 318 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 OR6K6Q8NGW6 343 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 RGP1Q92546 391 aaPredicted RBP9.18□□□□□ -0.94
TRIM56-204ENST00000487252 GAFA1Q96PS6 74 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 MRM2Q9UI43 246 aaKnown RBP9.18□□□□□ -0.94
TRIM56-204ENST00000487252 LRP12Q9Y561 859 aa9.18□□□□□ -0.94
TRIM56-204ENST00000487252 PSMB11A5LHX3 300 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 A6NLC8 198 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 NUDT19A8MXV4 375 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 A8MZ25 164 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 PDCD5O14737 125 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 EIF4EP06730 217 aaKnown RBP9.17□□□□□ -0.94
TRIM56-204ENST00000487252 GRPP07492 148 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 SLC2A2P11168 524 aaPredicted RBP9.17□□□□□ -0.94
TRIM56-204ENST00000487252 ALOX5APP20292 161 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 MAP2K3P46734 347 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 RAB25P57735 213 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 OR10A3P58181 314 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 NANOS3P60323 173 aaKnown RBP9.17□□□□□ -0.94
TRIM56-204ENST00000487252 ZNF260Q3ZCT1 412 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 ABCA11PQ4W5N1 156 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 WDR82Q6UXN9 313 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 BAIAP2L2Q6UXY1 529 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 ZNF329Q86UD4 541 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 OR4M1Q8NGD0 313 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 LRRC29Q8WV35 223 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 TSSK2Q96PF2 358 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 SPATA25Q9BR10 227 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 LIN7BQ9HAP6 207 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 RABL2AQ9UBK7 228 aaPredicted RBP9.17□□□□□ -0.94
TRIM56-204ENST00000487252 EXTL2Q9UBQ6 330 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 RABL2BQ9UNT1 228 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 B9D1Q9UPM9 204 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 TMEM14AQ9Y6G1 99 aa9.17□□□□□ -0.94
TRIM56-204ENST00000487252 TRBV5-7A0A0A0MS05 114 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms