RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 H2BFWTQ7Z2G1 175 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 SLC25A28Q96A46 364 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 GALMQ96C23 342 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 C10orf35Q96D05 121 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 PLEKHA2Q9HB19 425 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 TRGV8A0A0C4DH27 118 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 A0A0U1RQK1 487 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 SLC36A1Q7Z2H8 476 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 WDFY1Q8IWB7 410 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 BMPERQ8N8U9 685 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 CLRN3Q8NCR9 226 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 ABHD5Q8WTS1 349 aa11.45□□□□□ -0.58
HMGN1-216ENST00000486741 PIGBOS1A0A0B4J2F0 54 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 TSTD3H0UI37 97 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 PRAMEF6Q5VXH4 476 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 FAHD2BQ6P2I3 314 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-216ENST00000486741 CALHM1Q8IU99 346 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 TMEM123Q8N131 208 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 BPIFCQ8NFQ6 507 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 FAHD2AQ96GK7 314 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 OR10C1Q96KK4 312 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 LYZL4Q96KX0 146 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 DECR2Q9NUI1 292 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 LIPGQ9Y5X9 500 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 RCC1P18754 421 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-216ENST00000486741 RIPPLY2Q5TAB7 128 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 ZIC4Q8N9L1 334 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 SCCPDHQ8NBX0 429 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 RIMS4Q9H426 269 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-216ENST00000486741 MPC1Q9Y5U8 109 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 OR5B21A6NL26 309 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 HBG1P69891 147 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 HBG2P69892 147 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 RPUSD3Q6P087 351 aaKnown RBP11.44□□□□□ -0.58
HMGN1-216ENST00000486741 GFRALQ6UXV0 394 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 OR4A16Q8NH70 328 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 LRRC29Q8WV35 223 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 PIK3IP1Q96FE7 263 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 TAAR3PQ9P1P4 343 aa11.44□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF98A6NK75 572 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 TAAR5O14804 337 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 HEXAP06865 529 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 CEBPDP49716 269 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 PRAMEF5Q5TYX0 476 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 OR2A2Q6IF42 318 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 SLC16A13Q7RTY0 426 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 CPEB3Q8NE35 698 aaKnown RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 LOXL4Q96JB6 756 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF552Q9H707 407 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 RHOFQ9HBH0 211 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 PIPOXQ9P0Z9 390 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF107Q9UII5 783 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 MFNGO00587 321 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 MPPED1O15442 326 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 GPR12P47775 334 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 TMEM267Q0VDI3 215 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 VAX1Q5SQQ9 334 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 NKX2-6A6NCS4 301 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 LRRC3CA6NJW4 275 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 MPTX1A8MV57 137 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 ENSAO43768 121 aaKnown RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 FABP1P07148 127 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 CD59P13987 128 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 RBPJQ06330 500 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 PDLIM3Q53GG5 364 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF660Q6AZW8 331 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 BTNL3Q6UXE8 466 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 CISD2Q8N5K1 135 aaKnown RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 OPN3Q9H1Y3 402 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 OPA3Q9H6K4 179 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 TNFSF18Q9UNG2 199 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 PSG11Q9UQ72 335 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF106Q9H2Y7 1883 aaKnown RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 RRP8O43159 456 aaKnown RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 SYNGR3O43761 229 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 IFNA1P01562 189 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 NMBP08949 121 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 CD37P11049 281 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 P2RY4P51582 365 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 SMIM21Q3B7S5 101 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 OR5A2Q8NGI9 324 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 OR5C1Q8NGR4 320 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 LILRB1Q8NHL6 650 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-216ENST00000486741 CACNG5Q9UF02 275 aa11.43□□□□□ -0.58
HMGN1-216ENST00000486741 PCNX3Q9H6A9 2034 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 IGLV3-32A0A0A0MS00 114 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 A0A1W2PPV4 95 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 LRP5LA4QPB2 252 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF724A8MTY0 619 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 NEURL1O76050 574 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 LHFPL5Q8TAF8 219 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 ASB13Q8WXK3 278 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 Q96M66 194 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 IL36RNQ9UBH0 155 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms