RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 IHHQ14623 411 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 PDZD11Q5EBL8 140 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 AMMECR1LQ6DCA0 310 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 SSX7Q7RTT5 188 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 ZFP82Q8N141 532 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 C3orf22Q8N5N4 141 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 BPIFB6Q8NFQ5 453 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 DTD1Q8TEA8 209 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 PPWD1Q96BP3 646 aaKnown RBP2.34□□□□□ -2.03
SMC4-218ENST00000486711 CCDC127Q96BQ5 260 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 TVP23CQ96ET8 276 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 MRAP2Q96G30 205 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 ATP6V1G3Q96LB4 118 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 ACBD6Q9BR61 282 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 MED10Q9BTT4 135 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 TAS2R13Q9NYV9 303 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 FADS3Q9Y5Q0 445 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 TMEM131Q92545 1883 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 IGKV1OR2-108A0A075B7D4 117 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 FAM183AA6NL82 134 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 TCF21O43680 179 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 IGHV3-53P01767 116 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 SLC35E2BP0CK96 405 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 SYT1P21579 422 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 CNTFRP26992 372 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 S100A2P29034 98 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 MAGEA6P43360 314 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 OR2B6P58173 313 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 XRCC4Q13426 336 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 RAB31Q13636 194 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 TMEM249Q2WGJ8 235 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 OR10J3Q5JRS4 329 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 Q6ZQT7 251 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 COMTD1Q86VU5 262 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 ZNF664Q8N3J9 261 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 SLC25A45Q8N413 288 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 RPRMLQ8N4K4 120 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 ZNF738Q8NE65 137 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 ACTL9Q8TC94 416 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 RORBQ92753 470 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 GTF2H4Q92759 462 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 CLDN23Q96B33 292 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 PYURFQ96I23 114 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 NAGKQ9UJ70 344 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 POMPQ9Y244 141 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 R4GN34 69 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 POLR3AO14802 1390 aaPredicted RBP2.33□□□□□ -2.04
SMC4-218ENST00000486711 SVILO95425 2214 aa2.33□□□□□ -2.04
SMC4-218ENST00000486711 LOXHD1Q8IVV2 1947 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 IGHV1-45A0A0A0MS14 117 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 A0A0B4J2C4 111 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 A0A1B0GX12 115 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 POP7O75817 140 aaKnown RBP2.32□□□□□ -2.04
SMC4-218ENST00000486711 CBR3O75828 277 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 IGHMP01871 453 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 HRES1P13985 223 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 CD34P28906 385 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 CRABP2P29373 138 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 HSPA13P48723 471 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 RHOAP61586 193 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 ZNF141Q15928 474 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 PYDC2Q56P42 97 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 SPIN3Q5JUX0 258 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 FAM162BQ5T6X4 162 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 LRRC45Q96CN5 670 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 DDIT4LQ96D03 193 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 COMMD9Q9P000 198 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 CFAP45Q9UL16 551 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 BTRCQ9Y297 605 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 ZBED9Q6R2W3 1325 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 NID2Q14112 1375 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 SSH2Q76I76 1423 aa2.32□□□□□ -2.04
SMC4-218ENST00000486711 A0A1B0GTI1 187 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 LINC00854A0A1B0GVQ3 168 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 SYNGR2O43760 224 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 GPR75O95800 540 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 IGKV1D-33P01593 117 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 IGKV1-33P01594 117 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 ZNF3P17036 446 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 BCL2A1Q16548 175 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 RBM48Q5RL73 367 aaKnown RBP2.31□□□□□ -2.04
SMC4-218ENST00000486711 ZNF470Q6ECI4 717 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 TMEM25Q86YD3 366 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 ZIC4Q8N9L1 334 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 ATP6V1C2Q8NEY4 427 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 CCDC12Q8WUD4 166 aaPredicted RBP2.31□□□□□ -2.04
SMC4-218ENST00000486711 PDCD6IPQ8WUM4 868 aaKnown RBP2.31□□□□□ -2.04
SMC4-218ENST00000486711 FBXL15Q9H469 300 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 MAP3K19Q56UN5 1328 aa2.31□□□□□ -2.04
SMC4-218ENST00000486711 A8MWP4 228 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 CYTH3O43739 400 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 PDYNP01213 254 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 GUSBP08236 651 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 RCVRNP35243 200 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 FOXA1P55317 472 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 OR10A3P58181 314 aa2.3□□□□□ -2.04
SMC4-218ENST00000486711 TAF9Q16594 264 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms