RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 VWFP04275 2813 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 TRGV10A0A0A0MS01 117 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 TRBV5-7A0A0A0MS05 114 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 IGHV2-26A0A0B4J1V2 119 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 A0A1W2PRD5 423 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 A0A1W2PRF3 423 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 A0A1W2PRM7 423 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 ZNF729A6NN14 1252 aaPredicted RBP5.66□□□□□ -1.5
VPS50-218ENST00000485994 H3BUI4 141 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 H3BUX3 64 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 TIMM23O14925 209 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 RRP9O43818 475 aaKnown RBP5.66□□□□□ -1.5
VPS50-218ENST00000485994 ATP6V1G2O95670 118 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 LALBAP00709 142 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 IGLV1-47P01700 117 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 HCKP08631 526 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 CD37P11049 281 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 FSTP19883 344 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 GZMHP20718 246 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 BDKRB2P30411 391 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 ZNF93P35789 620 aaPredicted RBP5.66□□□□□ -1.5
VPS50-218ENST00000485994 WNT4P56705 351 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 AESQ08117 197 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 GPR176Q14439 515 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 OXLD1Q5BKU9 147 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 DHRS7BQ6IAN0 325 aaPredicted RBP5.66□□□□□ -1.5
VPS50-218ENST00000485994 UNQ9370/PRO34162Q6UXP9 181 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 LHFPL4Q7Z7J7 247 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 LYPD6Q86Y78 171 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 BATF2Q8N1L9 274 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 Q8N2B8 174 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 MS4A15Q8N5U1 240 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 ZNF596Q8TC21 504 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 TSEN15Q8WW01 171 aaKnown RBP5.66□□□□□ -1.5
VPS50-218ENST00000485994 PGLYRP3Q96LB9 341 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 SPACA5Q96QH8 159 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 METTL9Q9H1A3 318 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 VCXQ9H320 206 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 TNFRSF19Q9NS68 423 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 OR6C3Q9NZP0 311 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 IL36RNQ9UBH0 155 aa5.66□□□□□ -1.5
VPS50-218ENST00000485994 RRP15Q9Y3B9 282 aaKnown RBP5.66□□□□□ -1.5
VPS50-218ENST00000485994 TRAV24A0A0B4J272 114 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 KBTBD11-OT1A0A1B0GTJ5 212 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 ODAMA1E959 279 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 MEGF11A6BM72 1044 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 A6NDX4 124 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A10PA6NDY2 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A18PA6NE21 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A16PA6NEW6 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A20PA6NIJ5 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A7PA6NKC0 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A12PA8MX19 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A5PA8MXJ8 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A23PA8MXZ1 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 OOSP1A8MZH6 123 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 NPIPB11E5RHQ5 1161 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 LY6LH3BQJ8 138 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 SIRPB1O00241 398 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 GABRPO00591 440 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 MMP23AO75900 390 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 ARG1P05089 322 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 GLAP06280 429 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 GNAO1P09471 354 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A15PP0C7V4 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A13PP0C7W8 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A14PP0C7W9 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A24PP0C7X0 464 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 ZNF44P15621 663 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 HTR1DP28221 377 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 C21orf33P30042 268 aaPredicted RBP5.65□□□□□ -1.5
VPS50-218ENST00000485994 GLIPR1P48060 266 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 SOX2P48431 317 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 EFNB2P52799 333 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 PRRX1P54821 245 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 KRTAP10-3P60369 221 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 PRB3Q04118 309 aaPredicted RBP5.65□□□□□ -1.5
VPS50-218ENST00000485994 RSU1Q15404 277 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 C17orf58Q2M2W7 97 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 MPV17LQ2QL34 196 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 KRBOX4Q5JUW0 171 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 C6orf141Q5SZD1 244 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 LDLRAD2Q5SZI1 272 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 ZNF782Q6ZMW2 699 aaPredicted RBP5.65□□□□□ -1.5
VPS50-218ENST00000485994 THNSL2Q86YJ6 484 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 DYNAPQ8N1N2 210 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 ABHD12Q8N2K0 398 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 OSR2Q8N2R0 312 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 STX19Q8N4C7 294 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 TPRX1Q8N7U7 411 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 OR4D6Q8NGJ1 314 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 OR51A2Q8NGJ7 313 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 OR5D18Q8NGL1 313 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 TNFAIP8L1Q8WVP5 186 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 TAF15Q92804 592 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS50-218ENST00000485994 RFT1Q96AA3 541 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 COQ2Q96H96 371 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 GPER1Q99527 375 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 CLEC7AQ9BXN2 247 aa5.65□□□□□ -1.5
VPS50-218ENST00000485994 CHST6Q9GZX3 395 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms