RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 SAP30LQ9HAJ7 183 aa9.51□□□□□ -0.89
SND1-212ENST00000485871 ZNF222Q9UK12 451 aa9.51□□□□□ -0.89
SND1-212ENST00000485871 ST3GAL6Q9Y274 331 aa9.51□□□□□ -0.89
SND1-212ENST00000485871 KCNK7Q9Y2U2 307 aa9.51□□□□□ -0.89
SND1-212ENST00000485871 MED13LQ71F56 2210 aa9.51□□□□□ -0.89
SND1-212ENST00000485871 NF1P21359 2839 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 MFNGO00587 321 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 CD3DP04234 171 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 PTHLHP12272 177 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 CHATP28329 748 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 NKX2-5P52952 324 aaPredicted RBP9.5□□□□□ -0.89
SND1-212ENST00000485871 GNG2P59768 71 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 ZNF146Q15072 292 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 TAF9Q16594 264 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 MPV17LQ2QL34 196 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 RNASE10Q5GAN6 216 aaKnown RBP9.5□□□□□ -0.89
SND1-212ENST00000485871 ZNF626Q68DY1 528 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 Q6P435 159 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 LINC00596Q86U02 117 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 ASCC1Q8N9N2 400 aaKnown RBP9.5□□□□□ -0.89
SND1-212ENST00000485871 CHST4Q8NCG5 386 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 ST8SIA4Q92187 359 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 EMG1Q92979 244 aaKnown RBP9.5□□□□□ -0.89
SND1-212ENST00000485871 RAB3CQ96E17 227 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 CLEC4MQ9H2X3 399 aaPredicted RBP9.5□□□□□ -0.89
SND1-212ENST00000485871 IFT22Q9H7X7 185 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 SEBOXQ9HB31 216 aaPredicted RBP9.5□□□□□ -0.89
SND1-212ENST00000485871 RCC2Q9P258 522 aaKnown RBP9.5□□□□□ -0.89
SND1-212ENST00000485871 ANAPC10Q9UM13 185 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 PPP1R3CQ9UQK1 317 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 LAMP3Q9UQV4 416 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 MTORP42345 2549 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 NAV3Q8IVL0 2385 aa9.5□□□□□ -0.89
SND1-212ENST00000485871 CCDC168Q8NDH2 2452 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 DSCAML1Q8TD84 2053 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 PDZD2O15018 2839 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 hCG_1807616A0A1W2PRN6 198 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 TMEM235A6NFC5 223 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 SERPINE3A8MV23 424 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 RP2O75695 350 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 AMY2AP04746 511 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 GIPP09681 153 aaPredicted RBP9.49□□□□□ -0.89
SND1-212ENST00000485871 HIST1H1DP16402 221 aaKnown RBP9.49□□□□□ -0.89
SND1-212ENST00000485871 PRKACAP17612 351 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 NAT1P18440 290 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 AMY2BP19961 511 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 GLRA1P23415 457 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 RAP2BP61225 183 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 PDCD1Q15116 288 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 SPIN3Q5JUX0 258 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 FAM201AQ5SY85 155 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 TEX36Q5VZQ5 186 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 C20orf204Q6ZNR8 217 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 TRAPPC6BQ86SZ2 158 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 ZDHHC22Q8N966 263 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 OR11H7Q8NGC8 314 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 OR51S1Q8NGJ8 323 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 SCGB3A2Q96PL1 93 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 BEX2Q9BXY8 128 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 PECRQ9BY49 303 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 ZNF436Q9C0F3 470 aaPredicted RBP9.49□□□□□ -0.89
SND1-212ENST00000485871 EGLN1Q9GZT9 426 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 DECR2Q9NUI1 292 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 RASL12Q9NYN1 266 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 RNF7Q9UBF6 113 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 ELF5Q9UKW6 265 aaPredicted RBP9.49□□□□□ -0.89
SND1-212ENST00000485871 HSF4Q9ULV5 492 aa9.49□□□□□ -0.89
SND1-212ENST00000485871 TMEM178BH3BS89 294 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 RGS11O94810 467 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 NXPH2O95156 264 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 CYB5R3P00387 301 aaPredicted RBP9.48□□□□□ -0.89
SND1-212ENST00000485871 KNG1P01042 644 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 GSTT2P0CG29 244 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 GABRR1P24046 479 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 LMO1P25800 156 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 DUSP1P28562 367 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 BLVRBP30043 206 aaPredicted RBP9.48□□□□□ -0.89
SND1-212ENST00000485871 CD80P33681 288 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 SNU13P55769 128 aaKnown RBP9.48□□□□□ -0.89
SND1-212ENST00000485871 FAHD2BQ6P2I3 314 aaPredicted RBP9.48□□□□□ -0.89
SND1-212ENST00000485871 SLC36A1Q7Z2H8 476 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 FAM90A1Q86YD7 464 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 BPIFB2Q8N4F0 458 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 ARRDC1Q8N5I2 433 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 OR11L1Q8NGX0 322 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 NEU4Q8WWR8 484 aaPredicted RBP9.48□□□□□ -0.89
SND1-212ENST00000485871 FAHD2AQ96GK7 314 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 ARHGAP5-AS1Q96IT6 56 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 VRK1Q99986 396 aaPredicted RBP9.48□□□□□ -0.89
SND1-212ENST00000485871 OCSTAMPQ9BR26 566 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 RAB1BQ9H0U4 201 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 ZMAT3Q9HA38 289 aaKnown RBP9.48□□□□□ -0.89
SND1-212ENST00000485871 TMEM106BQ9NUM4 274 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 TREM2Q9NZC2 230 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 ZNF69Q9UC07 566 aa9.48□□□□□ -0.89
SND1-212ENST00000485871 IGKV1D-17A0A075B6S4 117 aa9.47□□□□□ -0.89
SND1-212ENST00000485871 TRAV24A0A0B4J272 114 aa9.47□□□□□ -0.89
SND1-212ENST00000485871 IGHV1-69-2A0A0G2JMI3 117 aa9.47□□□□□ -0.89
SND1-212ENST00000485871 TMEM82A0PJX8 343 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms