RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TOR1AO14656 332 aa5□□□□□ -1.61
SMC4-217ENST00000485867 SLC16A6O15403 523 aa5□□□□□ -1.61
SMC4-217ENST00000485867 IGKV1D-33P01593 117 aa5□□□□□ -1.61
SMC4-217ENST00000485867 IGKV1-33P01594 117 aa5□□□□□ -1.61
SMC4-217ENST00000485867 IGLV1-51P01701 117 aa5□□□□□ -1.61
SMC4-217ENST00000485867 H1F0P07305 194 aaKnown RBP5□□□□□ -1.61
SMC4-217ENST00000485867 VDAC1P21796 283 aa5□□□□□ -1.61
SMC4-217ENST00000485867 MPZP25189 248 aa5□□□□□ -1.61
SMC4-217ENST00000485867 FMO3P31513 532 aa5□□□□□ -1.61
SMC4-217ENST00000485867 PRRX1P54821 245 aa5□□□□□ -1.61
SMC4-217ENST00000485867 PITPNAQ00169 270 aa5□□□□□ -1.61
SMC4-217ENST00000485867 DGCR6Q14129 220 aa5□□□□□ -1.61
SMC4-217ENST00000485867 GRK1Q15835 563 aa5□□□□□ -1.61
SMC4-217ENST00000485867 IFI44LQ53G44 452 aa5□□□□□ -1.61
SMC4-217ENST00000485867 TNFAIP8L3Q5GJ75 292 aa5□□□□□ -1.61
SMC4-217ENST00000485867 LGALS9CQ6DKI2 356 aa5□□□□□ -1.61
SMC4-217ENST00000485867 TMEM65Q6PI78 240 aa5□□□□□ -1.61
SMC4-217ENST00000485867 CEMP1Q6PRD7 247 aaPredicted RBP5□□□□□ -1.61
SMC4-217ENST00000485867 LINC00322Q6ZN03 302 aaPredicted RBP5□□□□□ -1.61
SMC4-217ENST00000485867 ZNF573Q86YE8 665 aa5□□□□□ -1.61
SMC4-217ENST00000485867 PGAM4Q8N0Y7 254 aa5□□□□□ -1.61
SMC4-217ENST00000485867 FAM86B1Q8N7N1 296 aa5□□□□□ -1.61
SMC4-217ENST00000485867 Q8N9W7 124 aa5□□□□□ -1.61
SMC4-217ENST00000485867 OR8B12Q8NGG6 310 aa5□□□□□ -1.61
SMC4-217ENST00000485867 OR52N4Q8NGI2 321 aa5□□□□□ -1.61
SMC4-217ENST00000485867 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5□□□□□ -1.61
SMC4-217ENST00000485867 ITFG2Q969R8 447 aa5□□□□□ -1.61
SMC4-217ENST00000485867 KCTD7Q96MP8 289 aa5□□□□□ -1.61
SMC4-217ENST00000485867 OR4C12Q96R67 309 aa5□□□□□ -1.61
SMC4-217ENST00000485867 AMELYQ99218 206 aa5□□□□□ -1.61
SMC4-217ENST00000485867 HSPB9Q9BQS6 159 aa5□□□□□ -1.61
SMC4-217ENST00000485867 ABHD6Q9BV23 337 aa5□□□□□ -1.61
SMC4-217ENST00000485867 TMED9Q9BVK6 235 aa5□□□□□ -1.61
SMC4-217ENST00000485867 PARD6BQ9BYG5 372 aa5□□□□□ -1.61
SMC4-217ENST00000485867 CHST6Q9GZX3 395 aa5□□□□□ -1.61
SMC4-217ENST00000485867 ALX4Q9H161 411 aaPredicted RBP5□□□□□ -1.61
SMC4-217ENST00000485867 GAL3ST2Q9H3Q3 398 aa5□□□□□ -1.61
SMC4-217ENST00000485867 NIPAL2Q9H841 368 aa5□□□□□ -1.61
SMC4-217ENST00000485867 DNAJB9Q9UBS3 223 aa5□□□□□ -1.61
SMC4-217ENST00000485867 ZNF580Q9UK33 172 aa5□□□□□ -1.61
SMC4-217ENST00000485867 STUB1Q9UNE7 303 aa5□□□□□ -1.61
SMC4-217ENST00000485867 DNAH2Q9P225 4427 aa5□□□□□ -1.61
SMC4-217ENST00000485867 A0A087X0M5 115 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 A0A1B0GX30 115 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 PQLC2LA1A4F0 135 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 NCBP2LA6PVI3 153 aaKnown RBP4.99□□□□□ -1.61
SMC4-217ENST00000485867 FAM220BPB1ANY3 271 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 F8VVB4 439 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 F8VWA3 439 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 LINC01619G3V211 115 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 GYPBP06028 91 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 H2BFMP0C1H6 154 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 OR5H8P0DN80 308 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 PEX2P28328 305 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 ERP29P30040 261 aaKnown RBP4.99□□□□□ -1.61
SMC4-217ENST00000485867 P2RX3P56373 397 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 ZP1P60852 638 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 EBI3Q14213 229 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 DIAPH2-AS1Q14236 149 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 LCN1P1Q5VSP4 162 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 TRPM8Q7Z2W7 1104 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 CYP4Z1Q86W10 505 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 OR8H3Q8N146 312 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 PRR18Q8N4B5 295 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 Q8N6K4 173 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 OR8J3Q8NGG0 315 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 OR6N2Q8NGY6 317 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 SH3GL1Q99961 368 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 FUZQ9BT04 418 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 THAP7Q9BT49 309 aaPredicted RBP4.99□□□□□ -1.61
SMC4-217ENST00000485867 CHCHD3Q9NX63 227 aaKnown RBP4.99□□□□□ -1.61
SMC4-217ENST00000485867 TAS2R3Q9NYW6 316 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.99□□□□□ -1.61
SMC4-217ENST00000485867 ENPP4Q9Y6X5 453 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 U3KQV3 271 aa4.99□□□□□ -1.61
SMC4-217ENST00000485867 DMBT1Q9UGM3 2413 aaPredicted RBP4.99□□□□□ -1.61
SMC4-217ENST00000485867 DNAH17Q9UFH2 4485 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 IGHV4OR15-8A0A075B7B6 117 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 A0A087WW49 117 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 TRGV10A0A0A0MS01 117 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 TMEM120BA0PK00 339 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 FAM183AA6NL82 134 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 ZNF682O95780 498 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 HAND1O96004 215 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 NRASP01111 189 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 IGF1P05019 195 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 CLUP10909 449 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 SPI1P17947 270 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 GABRR1P24046 479 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 PPIFP30405 207 aaKnown RBP4.98□□□□□ -1.61
SMC4-217ENST00000485867 OR3A1P47881 315 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 RAB7AP51149 207 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 RIPPLY1Q0D2K3 151 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 IL24Q13007 206 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 CYLC2Q14093 348 aaPredicted RBP4.98□□□□□ -1.61
SMC4-217ENST00000485867 KPNB1Q14974 876 aaKnown RBP4.98□□□□□ -1.61
SMC4-217ENST00000485867 ZNF684Q5T5D7 378 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 LINC01590Q5TEZ4 76 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 SLX4IPQ5VYV7 408 aa4.98□□□□□ -1.61
SMC4-217ENST00000485867 ANGPTL5Q86XS5 388 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms