RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 WFDC9Q8NEX5 89 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 OR5AK2Q8NH90 309 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 TSEN15Q8WW01 171 aaKnown RBP13.69□□□□□ -0.22
SMC4-216ENST00000485645 PHF21AQ96BD5 680 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 NR1H4Q96RI1 486 aaPredicted RBP13.69□□□□□ -0.22
SMC4-216ENST00000485645 PPIL3Q9H2H8 161 aaKnown RBP13.69□□□□□ -0.22
SMC4-216ENST00000485645 INPP5EQ9NRR6 644 aa13.69□□□□□ -0.22
SMC4-216ENST00000485645 SMPD3Q9NY59 655 aaPredicted RBP13.69□□□□□ -0.22
SMC4-216ENST00000485645 TSSC4Q9Y5U2 329 aaPredicted RBP13.69□□□□□ -0.22
SMC4-216ENST00000485645 KBTBD11-OT1A0A1B0GTJ5 212 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 TCRBV4S1A1TA0A5B7 111 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 OOSP1A8MZH6 123 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 ANKRD65E5RJM6 399 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 H0YJX3 145 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 NFYBP25208 207 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 OR3A4PP47883 348 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 GBX2P52951 348 aaPredicted RBP13.68□□□□□ -0.22
SMC4-216ENST00000485645 LOXL3P58215 753 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 ZNF565Q8N9K5 539 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 OR51T1Q8NGJ9 327 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 OR9G1Q8NH87 305 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 RHOXF1Q8NHV9 184 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 CPNE2Q96FN4 548 aaPredicted RBP13.68□□□□□ -0.22
SMC4-216ENST00000485645 KIRREL1Q96J84 757 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 PDCD1LG2Q9BQ51 273 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 AMBNQ9NP70 447 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 C8orf4Q9NR00 106 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 AURKAIP1Q9NWT8 199 aaPredicted RBP13.68□□□□□ -0.22
SMC4-216ENST00000485645 ERVK13-1Q9NX77 482 aa13.68□□□□□ -0.22
SMC4-216ENST00000485645 E9PI62 339 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 LY6LH3BQJ8 138 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 M0QZK8 103 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 HSPB6O14558 160 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 MAGEB3O15480 346 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 RAB3AP20336 220 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 GLP1RP43220 463 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 RAB40BQ12829 278 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 LRRC36Q1X8D7 754 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 PAN3Q58A45 887 aaKnown RBP13.67□□□□□ -0.22
SMC4-216ENST00000485645 TCTEX1D4Q5JR98 221 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 LPCAT4Q643R3 524 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 ELP2Q6IA86 826 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 PXT1Q8NFP0 134 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 OR4X2Q8NGF9 303 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 MYDGFQ969H8 173 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 GPER1Q99527 375 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 ZNF649Q9BS31 505 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 BARHL1Q9BZE3 327 aa13.67□□□□□ -0.22
SMC4-216ENST00000485645 MEIKINA0A087WXM9 373 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 SH2D7A6NKC9 451 aaPredicted RBP13.66□□□□□ -0.22
SMC4-216ENST00000485645 PF4P02776 101 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 AMY1AP04745 511 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 AMY2AP04746 511 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 FAM106CPP0CH98 169 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 CGB3P0DN86 165 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 CGB7P0DN87 165 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 IGLL1P15814 213 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 C21orf33P30042 268 aaPredicted RBP13.66□□□□□ -0.22
SMC4-216ENST00000485645 C9orf152Q5JTZ5 239 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 UTF1Q5T230 341 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 FOXB2Q5VYV0 432 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 SATL1Q86VE3 508 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 PACRGLQ8N7B6 248 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 ZNF555Q8NEP9 628 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 CNIH3Q8TBE1 160 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 HAVCR2Q8TDQ0 301 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 TNFAIP8L1Q8WVP5 186 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 TOMM40LQ969M1 308 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 RPEQ96AT9 228 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 NCOR1P1Q9H4R4 102 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 PCDHB16Q9NRJ7 776 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 CALYQ9NYX4 217 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 KIF25Q9UIL4 384 aa13.66□□□□□ -0.22
SMC4-216ENST00000485645 RPL36Q9Y3U8 105 aaKnown RBP13.66□□□□□ -0.22
SMC4-216ENST00000485645 AMMECR1Q9Y4X0 333 aaPredicted RBP13.66□□□□□ -0.22
SMC4-216ENST00000485645 TRAV24A0A0B4J272 114 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 J3QR06 171 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 IL13RA2Q14627 380 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 RSU1Q15404 277 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 KLHL22Q53GT1 634 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 THNSL2Q86YJ6 484 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 OR52I1Q8NGK6 324 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 MRPS18AQ9NVS2 196 aaKnown RBP13.65□□□□□ -0.22
SMC4-216ENST00000485645 IDI2-AS1Q9NZ38 188 aa13.65□□□□□ -0.22
SMC4-216ENST00000485645 GABRPO00591 440 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 IL1AP01583 271 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 IGHV3-7P01780 117 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 SOX2P48431 317 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 SLC35A2P78381 396 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 KHDC1LQ5JSQ8 128 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 ZNF529Q6P280 563 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 OR51A2Q8NGJ7 313 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 OR10K1Q8NGX5 313 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 JAM3Q9BX67 310 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 FAM192AQ9GZU8 254 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 LINC00574Q9H8X3 128 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 TAS2R4Q9NYW5 299 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 PSG11Q9UQ72 335 aa13.64□□□□□ -0.23
SMC4-216ENST00000485645 MOB4Q9Y3A3 225 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms