RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SERPINA3P01011 423 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 LMO1P25800 156 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 RANBP1P43487 201 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 P2RX3P56373 397 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 ZNF85Q03923 595 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 CD69Q07108 199 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 EDDM3AQ14507 147 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 SMN1Q16637 294 aaKnown RBP10.35□□□□□ -0.75
HDAC6-227ENST00000485102 SPIN3Q5JUX0 258 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 RPL22L1Q6P5R6 122 aaKnown RBP10.35□□□□□ -0.75
HDAC6-227ENST00000485102 SLC25A26Q70HW3 274 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 AHSA2Q719I0 299 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 MRPL41Q8IXM3 137 aaKnown RBP10.35□□□□□ -0.75
HDAC6-227ENST00000485102 OSR2Q8N2R0 312 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 TPRX1Q8N7U7 411 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 TRMT10AQ8TBZ6 339 aaKnown RBP10.35□□□□□ -0.75
HDAC6-227ENST00000485102 FCGR1BQ92637 280 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 DPF1Q92782 380 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 SLAMF9Q96A28 289 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 TBX5Q99593 518 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 MCRIP2Q9BUT9 160 aaKnown RBP10.35□□□□□ -0.75
HDAC6-227ENST00000485102 GLS2Q9UI32 602 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 GTF2A1LQ9UNN4 478 aa10.35□□□□□ -0.75
HDAC6-227ENST00000485102 FUOMA2VDF0 154 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A18PA6NE21 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A16PA6NEW6 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A20PA6NIJ5 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A9PA6NNJ1 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A12PA8MX19 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A5PA8MXJ8 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 J3QLW9 94 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 MAGEB4O15481 346 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-227ENST00000485102 SYT7O43581 403 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 ISG15P05161 165 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 CD1AP06126 327 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A15PP0C7V4 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A13PP0C7W8 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A14PP0C7W9 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM90A24PP0C7X0 464 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 NHLRC4P0CG21 123 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-227ENST00000485102 ZNF19P17023 458 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 GABRR1P24046 479 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 CEACAM3P40198 252 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 OR3A1P47881 315 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 THBS3P49746 956 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 WNT4P56705 351 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 GPR50Q13585 617 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 KCTD21Q4G0X4 260 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 CCDC144NLQ6NUI1 221 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 C10orf99Q6UWK7 81 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 ETV3LQ6ZN32 361 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 LHFPL3Q86UP9 236 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 CATSPERDQ86XM0 798 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 THNSL2Q86YJ6 484 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 FAM58AQ8N1B3 248 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 OR51D1Q8NGF3 324 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 PP6455Q8WZ26 134 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 EMG1Q92979 244 aaKnown RBP10.34□□□□□ -0.75
HDAC6-227ENST00000485102 BORCS8Q96FH0 119 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 C4orf36Q96KX1 117 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 TTTY10Q9BZA0 68 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 GAL3ST2Q9H3Q3 398 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 PLEKHA1Q9HB21 404 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 ISYNA1Q9NPH2 558 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 ZFP57Q9NU63 452 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 BABAM2Q9NXR7 383 aa10.34□□□□□ -0.75
HDAC6-227ENST00000485102 TRGV10A0A0A0MS01 117 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 BUB1B-PAK6H3BSN5 160 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 CSN2P05814 226 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 CDK2P24941 298 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 CD24P25063 80 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 HOXD3P31249 432 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-227ENST00000485102 NPBWR2P48146 333 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 RBP2P50120 134 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 TRAM1Q15629 374 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 HLA-DRB5Q30154 266 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 NR1H4Q96RI1 486 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-227ENST00000485102 CCDC90BQ9GZT6 254 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 CHST6Q9GZX3 395 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 RHOFQ9HBH0 211 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
HDAC6-227ENST00000485102 IL36RNQ9UBH0 155 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 STAB2Q8WWQ8 2551 aa10.33□□□□□ -0.76
HDAC6-227ENST00000485102 PSMB11A5LHX3 300 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 RPP14O95059 124 aaKnown RBP10.32□□□□□ -0.76
HDAC6-227ENST00000485102 APOL3O95236 402 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 CYB5AP00167 134 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 CD2P06729 351 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 LIMS3P0CW19 117 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 LIMS4P0CW20 117 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 PSMA1P25786 263 aaKnown RBP10.32□□□□□ -0.76
HDAC6-227ENST00000485102 MYCNOSP40205 109 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 ATP1B3P54709 279 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 PRRX1P54821 245 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 RPL23AP62750 156 aaKnown RBP10.32□□□□□ -0.76
HDAC6-227ENST00000485102 ALKBH1Q13686 389 aaKnown RBP10.32□□□□□ -0.76
HDAC6-227ENST00000485102 TBCEQ15813 527 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-227ENST00000485102 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 UTS2BQ765I0 119 aa10.32□□□□□ -0.76
HDAC6-227ENST00000485102 TRAPPC6BQ86SZ2 158 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms