RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-204ENST00000483941 ETAA1Q9NY74 926 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 KCNK7Q9Y2U2 307 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 TLN2Q9Y4G6 2542 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 MXRA5Q9NR99 2828 aa11.72□□□□□ -0.53
SMAD9-204ENST00000483941 ANKRD20A5PA0PJZ0 165 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 SLC33A1O00400 549 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-204ENST00000483941 WNT9BO14905 357 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 PTTG1O95997 202 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 CYB5R3P00387 301 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-204ENST00000483941 PSG2P11465 335 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 DUSP1P28562 367 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 GABRA2P47869 451 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 EFNA4P52798 201 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 TMEM33P57088 247 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 TAS2R46P59540 309 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 MEF2DQ14814 521 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 ATPAF1Q5TC12 328 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-204ENST00000483941 MOB1BQ7L9L4 216 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 POC5Q8NA72 575 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 SPATA3Q8NHX4 192 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 ANGPTL6Q8NI99 470 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 RAB1CQ92928 201 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 TRIM63Q969Q1 353 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 CCL19Q99731 98 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 SULT4A1Q9BR01 284 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 BARX1Q9HBU1 254 aaPredicted RBP11.71□□□□□ -0.53
SMAD9-204ENST00000483941 KLK11Q9UBX7 282 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 AK3Q9UIJ7 227 aa11.71□□□□□ -0.53
SMAD9-204ENST00000483941 TRBV6-6A0A0A6YYG2 114 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 TRAV24A0A0B4J272 114 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 KIR2DS1A0A191URI9 304 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 A0A1W2PPR1 153 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 UBE2QL1A1L167 161 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 MEIOCA2RUB1 952 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
SMAD9-204ENST00000483941 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 SIRPB1O00241 398 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 CSN2P05814 226 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 AKAIN1P0CW23 69 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 DAOP14920 347 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 NAT1P18440 290 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 KIR2DS4P43632 304 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 PAX5Q02548 391 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 KIR2DS1Q14954 304 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 SPRNQ5BIV9 151 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 RNASE12Q5GAN4 147 aaKnown RBP11.7□□□□□ -0.54
SMAD9-204ENST00000483941 HOGA1Q86XE5 327 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 NUDCD2Q8WVJ2 157 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 SDSLQ96GA7 329 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 NCOR1P1Q9H4R4 102 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 RAB9BQ9NP90 201 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 COPZ2Q9P299 210 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 IL36RNQ9UBH0 155 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 CACNG2Q9Y698 323 aa11.7□□□□□ -0.54
SMAD9-204ENST00000483941 TMEM30CPA0ZSE6 113 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-204ENST00000483941 OVOL3O00110 214 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 MGST3O14880 152 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 LYRM1O43325 122 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 CTXN2P0C2S0 81 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 EGR1P18146 543 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 AMY2BP19961 511 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 CD80P33681 288 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 BTG1P62324 171 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 IL13RA1P78552 427 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 COL10A1Q03692 680 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 KLF9Q13886 244 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-204ENST00000483941 PDCD1Q15116 288 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 STUMQ69YW2 141 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 SFRP4Q6FHJ7 346 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-204ENST00000483941 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 TRAT1Q6PIZ9 186 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 Q6ZS49 121 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 ASCC1Q8N9N2 400 aaKnown RBP11.69□□□□□ -0.54
SMAD9-204ENST00000483941 ST6GALNAC5Q9BVH7 336 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF286AQ9HBT8 521 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 TMEM165Q9HC07 324 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF701Q9NV72 531 aaPredicted RBP11.69□□□□□ -0.54
SMAD9-204ENST00000483941 ANAPC10Q9UM13 185 aa11.69□□□□□ -0.54
SMAD9-204ENST00000483941 IGKV1D-17A0A075B6S4 117 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 DISC1C4P0D8 188 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 K7N7A8 449 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 SSX5O60225 188 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 NAPSAO96009 420 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 IFNA6P05013 189 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 PTHLHP12272 177 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 OR3A3P47888 321 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 ARPC4P59998 168 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 IFITM3Q01628 133 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 GUCA2AQ02747 115 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 ZMYND11Q15326 602 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 GRK1Q15835 563 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 CHRFAM7AQ494W8 412 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 RNASE10Q5GAN6 216 aaKnown RBP11.68□□□□□ -0.54
SMAD9-204ENST00000483941 STEAP1BQ6NZ63 245 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 ZNF554Q86TJ5 538 aa11.68□□□□□ -0.54
SMAD9-204ENST00000483941 TMEM17Q86X19 198 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms