RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ANKRD55Q3KP44 614 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 POLDIP2Q9Y2S7 368 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 M0R296 226 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 ACVR1Q04771 509 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 TBC1D28Q2M2D7 210 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 OR4F17Q8NGA8 305 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 TIMP4Q99727 224 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 C2orf88Q9BSF0 95 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 TRAV8-2A0A0B4J237 113 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 A0A1B0GTL3 188 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 IQCF3P0C7M6 154 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 TAF1P21675 1872 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 OR11G2Q8NGC1 345 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 MS4A6EQ96DS6 147 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 COA4Q9NYJ1 87 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 FER1L4A9Z1Z3 1794 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 A0A1W2PRS3 328 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 ESDP10768 282 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
COL12A1-207ENST00000483888 KISS1Q15726 138 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 TTC9BQ8N6N2 239 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 FLYWCH2Q96CP2 140 aaKnown RBP9.1□□□□□ -0.95
COL12A1-207ENST00000483888 IP6K3Q96PC2 410 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 SSBP4Q9BWG4 385 aaPredicted RBP9.1□□□□□ -0.95
COL12A1-207ENST00000483888 BCL2L10Q9HD36 194 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 KCNE3Q9Y6H6 103 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 LRP6O75581 1613 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 PRDX4Q13162 271 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 IRF3Q14653 427 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 MMDQ15546 238 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 CCSMST1Q4G0I0 132 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 MESTQ5EB52 335 aa9.1□□□□□ -0.95
COL12A1-207ENST00000483888 HSD17B10Q99714 261 aaKnown RBP9.1□□□□□ -0.95
COL12A1-207ENST00000483888 TRBV9A0A0B4J1U6 114 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 H3BUT2 72 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ALOX12BO75342 701 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 NDUFB4O95168 129 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 TMEM25Q86YD3 366 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 C20orf196Q8IYI0 205 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 MRPL24Q96A35 216 aaKnown RBP9.09□□□□□ -0.95
COL12A1-207ENST00000483888 OR2V2Q96R30 315 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 KLK8O60259 260 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ZFAND5O76080 213 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 PRSS23O95084 383 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 CEACAM6P40199 344 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 EMDP50402 254 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ACTL6AO96019 429 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 EFNB1P98172 346 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 OR5A1Q8NGJ0 315 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 TMEM230Q96A57 120 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 TARM1B6A8C7 271 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 NTSR1P30989 418 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ZDHHC23Q8IYP9 409 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ARFGEF1Q9Y6D6 1849 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 NKX6-3A6NJ46 265 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ZNF785A8K8V0 405 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 UPK1AO00322 258 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 DUSP3P51452 185 aaPredicted RBP9.09□□□□□ -0.95
COL12A1-207ENST00000483888 TMEM95Q3KNT9 176 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ZNF774Q6NX45 483 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 OR1B1Q8NGR6 318 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 FLRT3Q9NZU0 649 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 KCNMB2Q9Y691 235 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 H2BFSP57053 126 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ABHD17CQ6PCB6 329 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 USP3Q9Y6I4 520 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 PDCD11Q14690 1871 aaKnown RBP9.09□□□□□ -0.95
COL12A1-207ENST00000483888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.09□□□□□ -0.95
COL12A1-207ENST00000483888 APOMO95445 188 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 LYZL2Q7Z4W2 148 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 PIMREGQ9BSJ6 248 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 ERRFI1Q9UJM3 462 aaPredicted RBP9.09□□□□□ -0.95
COL12A1-207ENST00000483888 RARRES3Q9UL19 164 aa9.09□□□□□ -0.95
COL12A1-207ENST00000483888 POU2F2P09086 479 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 FMODQ06828 376 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 FAM110CQ1W6H9 321 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 PRICKLE4Q2TBC4 344 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 EDARADDQ8WWZ3 215 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 LSM10Q969L4 123 aaKnown RBP9.08□□□□□ -0.96
COL12A1-207ENST00000483888 GABRG3Q99928 467 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 RSPO3Q9BXY4 272 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-207ENST00000483888 HBZP02008 142 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 FNDC7Q5VTL7 733 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 P2RX4Q99571 388 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 HDHD3Q9BSH5 251 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-207ENST00000483888 BEX4Q9NWD9 120 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-207ENST00000483888 HS3ST2Q9Y278 367 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 GCM2O75603 506 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-207ENST00000483888 OR13C6PQ8NH95 151 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 PPIAL4DF5H284 164 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 BCAT2O15382 392 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-207ENST00000483888 SYNGR2O43760 224 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 PRR35P0CG20 571 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 RABIFP47224 123 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 RND3P61587 244 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 KIAA1644Q3SXP7 199 aa9.08□□□□□ -0.96
COL12A1-207ENST00000483888 ASCL4Q6XD76 172 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms