RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 UCP3P55916 312 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 KIR2DS1Q14954 304 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 ADIPOQQ15848 244 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 SPRNQ5BIV9 151 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 NEK7Q8TDX7 302 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 HYLS1Q96M11 299 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 OR2V2Q96R30 315 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 IL19Q9UHD0 177 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 PCNX1Q96RV3 2341 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 ZZEF1O43149 2961 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 DSPP15924 2871 aaKnown RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 A0A0B4J2A0 478 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 G3V3Q6 166 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 SMLR1H3BR10 107 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 SIRPB1O00241 398 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 HSPB6O14558 160 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 DUS4LO95620 317 aaKnown RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 IGHV1-46P01743 117 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 HLA-AP01891 365 aaKnown RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 CTXN2P0C2S0 81 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 RPS2P15880 293 aaKnown RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 IL13RA1P78552 427 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 SORDQ00796 357 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 SRSF4Q08170 494 aaKnown RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 ZNF497Q6ZNH5 498 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 PLPPR1Q8TBJ4 325 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 ASB13Q8WXK3 278 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 MOB3AQ96BX8 217 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 ESRP2Q9H6T0 727 aaKnown RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 SHPKQ9UHJ6 478 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 ERRFI1Q9UJM3 462 aaPredicted RBP11.83□□□□□ -0.52
CLK3-204ENST00000483723 WIPI2Q9Y4P8 454 aa11.83□□□□□ -0.52
CLK3-204ENST00000483723 SHISA9B4DS77 424 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
CLK3-204ENST00000483723 SPRY3O43610 288 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 SLC22A5O76082 557 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 SFT2D2O95562 160 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 SCTP09683 121 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 AKR1C4P17516 323 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 FCGR2CP31995 323 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 RAP2BP61225 183 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 SMIM21Q3B7S5 101 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 IGSF11Q5DX21 431 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 DMRTC2Q8IXT2 367 aaPredicted RBP11.82□□□□□ -0.52
CLK3-204ENST00000483723 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 ZFAND1Q8TCF1 268 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 ITLN1Q8WWA0 313 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 ERGIC1Q969X5 290 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 NDRG3Q9UGV2 375 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 SLC23A1Q9UHI7 598 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 FAM208BQ5VWN6 2430 aa11.82□□□□□ -0.52
CLK3-204ENST00000483723 RP1L1Q8IWN7 2480 aaPredicted RBP11.82□□□□□ -0.52
CLK3-204ENST00000483723 NKX2-6A6NCS4 301 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 DBX1A6NMT0 343 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 FAM90A27PA6NNH2 459 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 PSPNO60542 156 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 TUSC2O75896 110 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 CD55P08174 381 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 OR4A8P0C604 315 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 EGR1P18146 543 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 CD34P28906 385 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 KCNJ3P48549 501 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 H2BFSP57053 126 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 SUPT4H1P63272 117 aaKnown RBP11.81□□□□□ -0.52
CLK3-204ENST00000483723 HERPUD1Q15011 391 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 CDSNQ15517 529 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 LY6G6FQ5SQ64 297 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 MOB1BQ7L9L4 216 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 DIRC2Q96SL1 478 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 TMPRSS13Q9BYE2 586 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 FXYD6Q9H0Q3 95 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 MBNL3Q9NUK0 354 aaKnown RBP11.81□□□□□ -0.52
CLK3-204ENST00000483723 MGAT4AQ9UM21 535 aa11.81□□□□□ -0.52
CLK3-204ENST00000483723 IGKV1-6A0A0C4DH72 117 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 hCG_1807616A0A1W2PRN6 198 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 VSTM5A8MXK1 200 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 PGAM2P15259 253 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 PI3P19957 117 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 GLP1RP43220 463 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 GMFBP60983 142 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 SEC61A1P61619 476 aaKnown RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
CLK3-204ENST00000483723 PAX5Q02548 391 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 BAMBIQ13145 260 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 LAMTOR1Q6IAA8 161 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 SLC35E4Q6ICL7 350 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 C5orf24Q7Z6I8 188 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 MOGAT3Q86VF5 341 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 OR11H4Q8NGC9 324 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 OR4A4PQ8NGN8 299 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 Q8TCH9 128 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 LRRC46Q96FV0 321 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 PLPPR2Q96GM1 343 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 CABLES2Q9BTV7 478 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 OR14J1Q9UGF5 321 aa11.8□□□□□ -0.52
CLK3-204ENST00000483723 PCDHB10Q9UN67 800 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms