RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 HEPN1Q6WQI6 88 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 LIAT1Q6ZQX7 453 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 NANOGP1Q8N7R0 232 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 Q8NFD4 153 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 NDNFQ8TB73 568 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 THRSPQ92748 146 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 MYDGFQ969H8 173 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 COQ2Q96H96 371 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 FKBP14Q9NWM8 211 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 ING3Q9NXR8 418 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 IL36GQ9NZH8 169 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 OR6C3Q9NZP0 311 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 MINOS1-NBL1R4GNA1 71 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
VARS-225ENST00000482996 TRBV5-7A0A0A0MS05 114 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 VGLL3A8MV65 326 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 HSPB6O14558 160 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 ZNF780AO75290 641 aaPredicted RBP11.24□□□□□ -0.61
VARS-225ENST00000482996 CDRT1O95170 752 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 CDK1P06493 297 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 FSTP19883 344 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 CDK2P24941 298 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 KCNJ3P48549 501 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 GABARAPL2P60520 117 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 RPS11P62280 158 aaKnown RBP eCLIP11.24□□□□□ -0.61
VARS-225ENST00000482996 BDH1Q02338 343 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 PRAMEF5Q5TYX0 476 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 RTN4RL2Q86UN3 420 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 OSR2Q8N2R0 312 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 DTX3Q8N9I9 347 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 OR4D6Q8NGJ1 314 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 OR4C13Q8NGP0 309 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 ORAI1Q96D31 301 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 OR14A2Q96R54 314 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 NKX3-1Q99801 234 aaPredicted RBP11.24□□□□□ -0.61
VARS-225ENST00000482996 MND1Q9BWT6 205 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 BARHL1Q9BZE3 327 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 FOXJ3Q9UPW0 622 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 ST3GAL6Q9Y274 331 aa11.24□□□□□ -0.61
VARS-225ENST00000482996 MEIKINA0A087WXM9 373 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 TRAV24A0A0B4J272 114 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 ZNF729A6NN14 1252 aaPredicted RBP11.23□□□□□ -0.61
VARS-225ENST00000482996 PTGES3LE9PB15 166 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 MMP23AO75900 390 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 OR7C1O76099 320 aaPredicted RBP11.23□□□□□ -0.61
VARS-225ENST00000482996 MAPK3P27361 379 aaPredicted RBP11.23□□□□□ -0.61
VARS-225ENST00000482996 GABRA5P31644 462 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 GLP1RP43220 463 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 PROK1P58294 105 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 GPR176Q14439 515 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 PIGYQ3MUY2 71 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 NHLRC3Q5JS37 347 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 RNLSQ5VYX0 342 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 SLC35E4Q6ICL7 350 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 LINC00596Q86U02 117 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 ABHD12Q8N2K0 398 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 JAGN1Q8N5M9 183 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 ZNF565Q8N9K5 539 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 ZNF596Q8TC21 504 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 CDCA4Q9BXL8 241 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 NPFFR1Q9GZQ6 430 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 CCDC90BQ9GZT6 254 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 PPIL3Q9H2H8 161 aaKnown RBP11.23□□□□□ -0.61
VARS-225ENST00000482996 NCOR1P1Q9H4R4 102 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 PITPNC1Q9UKF7 332 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 HILPDAQ9Y5L2 63 aa11.23□□□□□ -0.61
VARS-225ENST00000482996 TRAV8-7A0A075B6U6 113 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 A0A087WXM4 84 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 A0A1W2PPK0 400 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 H3BUI4 141 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 F2RL2O00254 374 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 TOR1AO14656 332 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 TIMM23O14925 209 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 GTF2F2P13984 249 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 SERPINA2P20848 420 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 HTR1DP28221 377 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 RBM11P57052 281 aaKnown RBP11.22□□□□□ -0.61
VARS-225ENST00000482996 SRSF4Q08170 494 aaKnown RBP11.22□□□□□ -0.61
VARS-225ENST00000482996 SLC22A6Q4U2R8 563 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 CDH26Q8IXH8 852 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 TSPAN14Q8NG11 270 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 PIFOQ8TCI5 191 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 DERL3Q96Q80 235 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 CITED1Q99966 193 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 MRPS26Q9BYN8 205 aaKnown RBP11.22□□□□□ -0.61
VARS-225ENST00000482996 RANBP3Q9H6Z4 567 aaPredicted RBP11.22□□□□□ -0.61
VARS-225ENST00000482996 IFT22Q9H7X7 185 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 FBLN5Q9UBX5 448 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 KIF25Q9UIL4 384 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 TCF19Q9Y242 345 aa11.22□□□□□ -0.61
VARS-225ENST00000482996 KBTBD11-OT1A0A1B0GTJ5 212 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 RGS10O43665 173 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 MAS1P04201 325 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 CRHBPP24387 322 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 CD34P28906 385 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 KIR2DS4P43632 304 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 RAB13P51153 203 aa11.21□□□□□ -0.61
VARS-225ENST00000482996 DYNLT3P51808 116 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms