RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 TMEM171Q8WVE6 324 aa12.39□□□□□ -0.43
COL9A2-207ENST00000482722 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
COL9A2-207ENST00000482722 LYZL4Q96KX0 146 aa12.39□□□□□ -0.43
COL9A2-207ENST00000482722 SLC7A11Q9UPY5 501 aa12.39□□□□□ -0.43
COL9A2-207ENST00000482722 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 ONECUT2O95948 504 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 CELA2AP08217 269 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 RELQ04864 619 aaPredicted RBP12.38□□□□□ -0.43
COL9A2-207ENST00000482722 ZNF266Q14584 549 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 GNMTQ14749 295 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 TAF9Q16594 264 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 ZNF880Q6PDB4 577 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 TMEM183AQ8IXX5 376 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 SUMF1Q8NBK3 374 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 OR11L1Q8NGX0 322 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 HAS2Q92819 552 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 MSI2Q96DH6 328 aaKnown RBP12.38□□□□□ -0.43
COL9A2-207ENST00000482722 CCDC74BQ96LY2 380 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 MOB1AQ9H8S9 216 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 PILRBQ9UKJ0 227 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 IGHV3-15A0A0B4J1V0 119 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 G3V3Y1 287 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 JMJD7P0C870 316 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 CCL4P13236 92 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 CD200P41217 278 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 RUNX1Q01196 453 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 PMS2CLQ68D20 193 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 RHBDD2Q6NTF9 364 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 MAML2Q8IZL2 1156 aaPredicted RBP12.38□□□□□ -0.43
COL9A2-207ENST00000482722 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
COL9A2-207ENST00000482722 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
COL9A2-207ENST00000482722 TRAF3IP2O43734 574 aaPredicted RBP12.37□□□□□ -0.43
COL9A2-207ENST00000482722 PNLIPP16233 465 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 CLDN17P56750 224 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 PDCD1Q15116 288 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 DOK3Q7L591 496 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 LRTM2Q8N967 370 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 OR4X1Q8NH49 305 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 CALHM2Q9HA72 323 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 SLC2A9Q9NRM0 540 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 CLDN34H7C241 214 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 SFTPCP11686 197 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 EPHA1P21709 976 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 RND2P52198 227 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 MEX3BQ6ZN04 569 aaKnown RBP12.37□□□□□ -0.43
COL9A2-207ENST00000482722 TMEM123Q8N131 208 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 OR4D5Q8NGN0 318 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 RNASEH2CQ8TDP1 164 aaKnown RBP12.37□□□□□ -0.43
COL9A2-207ENST00000482722 MRGPRX4Q96LA9 322 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 TM2D1Q9BX74 207 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 PCED1AQ9H1Q7 454 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 MYOTQ9UBF9 498 aa12.37□□□□□ -0.43
COL9A2-207ENST00000482722 SPENQ96T58 3664 aaKnown RBP12.37□□□□□ -0.43
COL9A2-207ENST00000482722 COL5A1P20908 1838 aaPredicted RBP12.37□□□□□ -0.43
COL9A2-207ENST00000482722 SPRY1O43609 319 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-207ENST00000482722 PITX3O75364 302 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 RAB11AP62491 216 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 SLC10A1Q14973 349 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 WDR74Q6RFH5 385 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-207ENST00000482722 LGI3Q8N145 548 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 ACTR3CQ9C0K3 210 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-207ENST00000482722 B4DEV8 164 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 PHF1O43189 567 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-207ENST00000482722 NR2C1P13056 603 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 HOXA6P31267 233 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 SUMO3P55854 103 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-207ENST00000482722 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 FAM90A2PQ658T7 463 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 BATF2Q8N1L9 274 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 C11orf1Q9H5F2 150 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 CDH20Q9HBT6 801 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 ZNF160Q9HCG1 818 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 GLRX2Q9NS18 164 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 PIGLQ9Y2B2 252 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 A0A1B0GU03 582 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 LAMTOR5O43504 91 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 NXPH3O95157 252 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 CCL1P22362 96 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 OR5L2Q8NGL0 311 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 CABLES2Q9BTV7 478 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 SNHG12Q9BXW3 62 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 DEFB126Q9BYW3 111 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
COL9A2-207ENST00000482722 PCNX2A6NKB5 2137 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 A0A1W2PNV4 684 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 HSPA12AO43301 675 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 TGOLN2O43493 480 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 CA11O75493 328 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 CST7O76096 145 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 ALDH3B1P43353 468 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 TMEM217Q8N7C4 229 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 OR1P1Q8NH06 330 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 GPHA2Q96T91 129 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 GPR173Q9NS66 373 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 NECAP2Q9NVZ3 263 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 TRBV24-1A0A075B6N3 115 aa12.35□□□□□ -0.43
COL9A2-207ENST00000482722 LOC102723971A0A1B0GUV8 181 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms