RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 UBE2NLQ5JXB2 153 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4L9Q6RFH8 374 aaPredicted RBP12.7□□□□□ -0.38
CCM2-215ENST00000482714 BTNL3Q6UXE8 466 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 GAPTQ8N292 157 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 CORO2AQ92828 525 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 MSI2Q96DH6 328 aaKnown RBP12.7□□□□□ -0.38
CCM2-215ENST00000482714 RAB3CQ96E17 227 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 NICN1Q9BSH3 213 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 SLIRPQ9GZT3 109 aaKnown RBP12.7□□□□□ -0.38
CCM2-215ENST00000482714 NXF2Q9GZY0 626 aaKnown RBP12.7□□□□□ -0.38
CCM2-215ENST00000482714 MMP27Q9H306 513 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.381e-6■■■■□ 24.6
CCM2-215ENST00000482714 COMMD3Q9UBI1 195 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 DUX4Q9UBX2 424 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 ABCA1O95477 2261 aa12.7□□□□□ -0.38
CCM2-215ENST00000482714 hADV38S2A0JD32 116 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 SERPINE3A8MV23 424 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 FCN3O75636 299 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 TFF1P04155 84 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 SELLP14151 372 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 GZMHP20718 246 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 P2RX3P56373 397 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 RPL31P62899 125 aaKnown RBP12.69□□□□□ -0.38
CCM2-215ENST00000482714 LCN2P80188 198 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 CR1LQ2VPA4 569 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 KRBOX4Q5JUW0 171 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 GLCCI1Q86VQ1 547 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 MAPK1IP1LQ8NDC0 245 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 DACT3Q96B18 629 aaPredicted RBP12.69□□□□□ -0.38
CCM2-215ENST00000482714 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 KCNK15Q9H427 330 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 OR6C3Q9NZP0 311 aa12.69□□□□□ -0.38
CCM2-215ENST00000482714 A0A0A6YYD4 124 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 IGHV2-70DA0A0C4DH43 119 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 A0A0G2JMP0 313 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 A0A0X1KG70 313 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 hCG_1809904A0A1W2PP81 198 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 A0A1W2PPE2 198 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 A0A1W2PR64 198 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 A0A1W2PRV1 198 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 J3QLI3 93 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 SMAD7O15105 426 aaKnown RBP12.68□□□□□ -0.38
CCM2-215ENST00000482714 XRCC3O43542 346 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 CD5LO43866 347 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 PPIAL4GP0DN37 164 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 AESQ08117 197 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 BIVMQ86UB2 503 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 BPIFB2Q8N4F0 458 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 OR4M2Q8NGB6 313 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 CHST6Q9GZX3 395 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 TAS2R3Q9NYW6 316 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
CCM2-215ENST00000482714 ADAM30Q9UKF2 790 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 UBE2J1Q9Y385 318 aaPredicted RBP12.68□□□□□ -0.38
CCM2-215ENST00000482714 INSIG2Q9Y5U4 225 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 ZNF469Q96JG9 3925 aaPredicted RBP12.68□□□□□ -0.38
CCM2-215ENST00000482714 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■■□□ 15.8
CCM2-215ENST00000482714 CR1P17927 2039 aa12.68□□□□□ -0.38
CCM2-215ENST00000482714 TMEM30CPA0ZSE6 113 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 MT-ND4P03905 459 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 GSTP1P09211 210 aaKnown RBP12.67□□□□□ -0.38
CCM2-215ENST00000482714 EDDM3BP56851 147 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 PITPNAQ00169 270 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 PAX8Q06710 450 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 PLA2G7Q13093 441 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 PNLIPRP3Q17RR3 467 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 NKAPLQ5M9Q1 402 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 RSBN1Q5VWQ0 802 aaPredicted RBP12.67□□□□□ -0.38
CCM2-215ENST00000482714 TMEM200BQ69YZ2 307 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 ZNF554Q86TJ5 538 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 CMTM4Q8IZR5 234 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 TEX29Q8N6K0 151 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 MCFD2Q8NI22 146 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 NEK7Q8TDX7 302 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 C15orf40Q8WUR7 153 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 H1FXQ92522 213 aaKnown RBP12.67□□□□□ -0.38
CCM2-215ENST00000482714 SLC25A38Q96DW6 304 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 ARHGAP5-AS1Q96IT6 56 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 FAAP24Q9BTP7 215 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 PECRQ9BY49 303 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 RAB9BQ9NP90 201 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 HIF1ANQ9NWT6 349 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 ETAA1Q9NY74 926 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 KPTNQ9Y664 436 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 LINC00312Q9Y6C7 94 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
CCM2-215ENST00000482714 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 TRBV6-6A0A0A6YYG2 114 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 ODAMA1E959 279 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 C22orf46C9J442 243 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 MELTFP08582 738 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 HIST1H1DP16402 221 aaKnown RBP12.66□□□□□ -0.38
CCM2-215ENST00000482714 PLAC9Q5JTB6 97 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 DCAF12L2Q5VW00 463 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 FOXB2Q5VYV0 432 aa12.66□□□□□ -0.38
CCM2-215ENST00000482714 C6orf201Q7Z4U5 140 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms