RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 MOGAT2Q3SYC2 334 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 CD276Q5ZPR3 534 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 GLCCI1Q86VQ1 547 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 Q8N7P7 452 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 CHST4Q8NCG5 386 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 OR5D13Q8NGL4 314 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 DYRK2Q92630 601 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 DPCDQ9BVM2 203 aaPredicted RBP10.06□□□□□ -0.8
TRA2B-212ENST00000480461 TMEM59Q9BXS4 323 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 CST11Q9H112 138 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 DCSTAMPQ9H295 470 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 ING3Q9NXR8 418 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 RAB22AQ9UL26 194 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 KCNK7Q9Y2U2 307 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 PEX16Q9Y5Y5 336 aa10.06□□□□□ -0.8
TRA2B-212ENST00000480461 TRAV39A0A0B4J263 110 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 DPPA5A6NC42 116 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A10PA6NDY2 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A18PA6NE21 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A16PA6NEW6 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A20PA6NIJ5 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A8PA6NJQ4 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A7PA6NKC0 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A22PA8MWA6 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A12PA8MX19 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A5PA8MXJ8 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A23PA8MXZ1 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 H3BMQ9 156 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 RAB27BO00194 218 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 MGST3O14880 152 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A15PP0C7V4 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A13PP0C7W8 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A14PP0C7W9 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAM90A24PP0C7X0 464 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 PPIAL4GP0DN37 164 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 CGB3P0DN86 165 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 CGB7P0DN87 165 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 MMP9P14780 707 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FUT3P21217 361 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 CHATP28329 748 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 VEGFCP49767 419 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 DLX6P56179 175 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 ARF6P62330 175 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 RPL31P62899 125 aaKnown RBP10.05□□□□□ -0.8
TRA2B-212ENST00000480461 PRB3Q04118 309 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-212ENST00000480461 EDDM3AQ14507 147 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 ZNF273Q14593 569 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 ATXN7L3Q14CW9 347 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-212ENST00000480461 CR1LQ2VPA4 569 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 C11orf91Q3C1V1 193 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 PAN3Q58A45 887 aaKnown RBP10.05□□□□□ -0.8
TRA2B-212ENST00000480461 PLAC9Q5JTB6 97 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 ATAD3CQ5T2N8 411 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 DCAF12L2Q5VW00 463 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 RSBN1Q5VWQ0 802 aaPredicted RBP10.05□□□□□ -0.8
TRA2B-212ENST00000480461 RAB12Q6IQ22 244 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 Q6ZPA2 131 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 C6orf201Q7Z4U5 140 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 C5orf24Q7Z6I8 188 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 LINC00596Q86U02 117 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 LGALS14Q8TCE9 139 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 ISOC1Q96CN7 298 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 SLC25A38Q96DW6 304 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 SULT4A1Q9BR01 284 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 FAAP24Q9BTP7 215 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 TENM1Q9UKZ4 2725 aa10.05□□□□□ -0.8
TRA2B-212ENST00000480461 UBE2QL1A1L167 161 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 ENSAO43768 121 aaKnown RBP10.04□□□□□ -0.8
TRA2B-212ENST00000480461 MT-ND4P03905 459 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 CSN2P05814 226 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 CCL3L1P16619 93 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 SRD5A1P18405 259 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 RAB6AP20340 208 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 ERP29P30040 261 aaKnown RBP10.04□□□□□ -0.8
TRA2B-212ENST00000480461 BLVRBP30043 206 aaPredicted RBP10.04□□□□□ -0.8
TRA2B-212ENST00000480461 P2RX3P56373 397 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 EDDM3BP56851 147 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 FOXB2Q5VYV0 432 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 OLFML2AQ68BL7 652 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 IL17RELQ6ZVW7 336 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 USP43Q70EL4 1123 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 GDPD3Q7L5L3 318 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 DYNC2LI1Q8TCX1 351 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 PTX4Q96A99 478 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 TBX15Q96SF7 602 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 SIRPDQ9H106 197 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 C7orf69Q9H7B7 122 aa10.04□□□□□ -0.8
TRA2B-212ENST00000480461 DOCK11Q5JSL3 2073 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 TRBV23-1A0A0A0MS06 115 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 A0A0G2JMP0 313 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 A0A0X1KG70 313 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 PDCD6O75340 191 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 MMP23AO75900 390 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 LIPFP07098 398 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 PAX5Q02548 391 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 KLF17Q5JT82 389 aaPredicted RBP10.03□□□□□ -0.8
TRA2B-212ENST00000480461 KRBOX4Q5JUW0 171 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 FAM120AOSQ5T036 256 aa10.03□□□□□ -0.8
TRA2B-212ENST00000480461 UTF1Q5T230 341 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms