RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 SHARPINQ9H0F6 387 aa5.35□□□□□ -1.55
HERC4-210ENST00000480158 ZNF665Q9H7R5 613 aa5.35□□□□□ -1.55
HERC4-210ENST00000480158 RHOFQ9HBH0 211 aa5.35□□□□□ -1.55
HERC4-210ENST00000480158 LPAR2Q9HBW0 351 aa5.35□□□□□ -1.55
HERC4-210ENST00000480158 CHMP1AQ9HD42 196 aaPredicted RBP5.35□□□□□ -1.55
HERC4-210ENST00000480158 MYOZ1Q9NP98 299 aaPredicted RBP5.35□□□□□ -1.55
HERC4-210ENST00000480158 AK3Q9UIJ7 227 aa5.35□□□□□ -1.55
HERC4-210ENST00000480158 ZNF222Q9UK12 451 aa5.35□□□□□ -1.55
HERC4-210ENST00000480158 V9GYH0 126 aa5.35□□□□□ -1.55
HERC4-210ENST00000480158 CCDC168Q8NDH2 2452 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 IGHV4-61A0A0C4DH41 118 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 LINC00854A0A1B0GVQ3 168 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 NKX6-3A6NJ46 265 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 J3QRK9 145 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 FCN3O75636 299 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 TK1P04183 234 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 IL2RGP31785 369 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 RANBP1P43487 201 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 OR3A1P47881 315 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 GLIPR1P48060 266 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 MRPS15P82914 257 aaKnown RBP5.34□□□□□ -1.55
HERC4-210ENST00000480158 DYNC1I2Q13409 638 aaKnown RBP5.34□□□□□ -1.55
HERC4-210ENST00000480158 IL13RA2Q14627 380 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 NHLRC3Q5JS37 347 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 ZNF788Q6ZQV5 615 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 GDPD3Q7L5L3 318 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 SLC36A1Q7Z2H8 476 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 CCDC190Q86UF4 302 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 PRR18Q8N4B5 295 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 PLPPR1Q8TBJ4 325 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 Q96MF0 132 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 DCTN5Q9BTE1 182 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 ST6GALNAC5Q9BVH7 336 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 AUNIPQ9H7T9 357 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 BEX4Q9NWD9 120 aaPredicted RBP5.34□□□□□ -1.55
HERC4-210ENST00000480158 ETAA1Q9NY74 926 aa5.34□□□□□ -1.55
HERC4-210ENST00000480158 SLC25A10Q9UBX3 287 aaPredicted RBP5.34□□□□□ -1.55
HERC4-210ENST00000480158 MEIKINA0A087WXM9 373 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 FOXI3A8MTJ6 420 aaPredicted RBP5.34□□□□□ -1.56
HERC4-210ENST00000480158 SIGLEC5O15389 551 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 NDUFB3O43676 98 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 ZNF737O75373 536 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 CD3GP09693 182 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 NR4A2P43354 598 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 GNG2P59768 71 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 DGCR2P98153 550 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 KCNJ8Q15842 424 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 FAM189A2Q15884 450 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 ZNF79Q15937 498 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 ZNF260Q3ZCT1 412 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 KRBOX4Q5JUW0 171 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 TRAPPC6BQ86SZ2 158 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 MUC20Q8N307 709 aaPredicted RBP5.34□□□□□ -1.56
HERC4-210ENST00000480158 ZNF561Q8N587 486 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 GVQW1Q8N7I0 195 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 WFDC11Q8NEX6 87 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 CLDND2Q8NHS1 167 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 SDSLQ96GA7 329 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 WDFY2Q96P53 400 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 CMSS1Q9BQ75 279 aaKnown RBP5.34□□□□□ -1.56
HERC4-210ENST00000480158 SPACA1Q9HBV2 294 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 KLK11Q9UBX7 282 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 KIF25Q9UIL4 384 aa5.34□□□□□ -1.56
HERC4-210ENST00000480158 ANKRD34BA5PLL1 514 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 K7N7A8 449 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 MFNGO00587 321 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 TNFRSF13BO14836 293 aaPredicted RBP5.33□□□□□ -1.56
HERC4-210ENST00000480158 PAX1P15863 534 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 RCC1P18754 421 aaPredicted RBP5.33□□□□□ -1.56
HERC4-210ENST00000480158 GIFP27352 417 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 PRSS3P35030 304 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 ERVFRD-1P60508 538 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 LCN2P80188 198 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 LSAMPQ13449 338 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 RBM39Q14498 530 aaKnown RBP5.33□□□□□ -1.56
HERC4-210ENST00000480158 LRRC10Q5BKY1 277 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 HACD4Q5VWC8 232 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 LINC00596Q86U02 117 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 OR8H2Q8N162 312 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 SPICQ8N5J4 248 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 OR52I2Q8NH67 350 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 COQ2Q96H96 371 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 MED30Q96HR3 178 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 CMTM3Q96MX0 182 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 AKIP1Q9NQ31 210 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 RCC2Q9P258 522 aaKnown RBP5.33□□□□□ -1.56
HERC4-210ENST00000480158 CLN8Q9UBY8 286 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A10PA6NDY2 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A18PA6NE21 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A16PA6NEW6 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A20PA6NIJ5 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A8PA6NJQ4 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A7PA6NKC0 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A22PA8MWA6 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A12PA8MX19 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A5PA8MXJ8 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 FAM90A23PA8MXZ1 464 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 LANCL1O43813 399 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 SSX5O60225 188 aa5.33□□□□□ -1.56
HERC4-210ENST00000480158 EIF4EBP3O60516 100 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms