RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ZNF2Q9BSG1 426 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-204ENST00000480057 WDR13Q9H1Z4 485 aa9.3□□□□□ -0.92
VTI1A-204ENST00000480057 CLEC4MQ9H2X3 399 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-204ENST00000480057 TMEM165Q9HC07 324 aa9.3□□□□□ -0.92
VTI1A-204ENST00000480057 DLL4Q9NR61 685 aa9.3□□□□□ -0.92
VTI1A-204ENST00000480057 C1orf123Q9NWV4 160 aa9.3□□□□□ -0.92
VTI1A-204ENST00000480057 SLC23A1Q9UHI7 598 aa9.3□□□□□ -0.92
VTI1A-204ENST00000480057 WIPI2Q9Y4P8 454 aa9.3□□□□□ -0.92
VTI1A-204ENST00000480057 NPIPB11E5RHQ5 1161 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 HS3ST1O14792 307 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 SFT2D2O95562 160 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 LHBP01229 141 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 TK1P04183 234 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 PGAM2P15259 253 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 HLA-DRB3P79483 266 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 KCNJ8Q15842 424 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 ADIPOQQ15848 244 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 IGFBP7Q16270 282 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 SLC35E4Q6ICL7 350 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 ZNF826PQ6ZT77 177 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 NLRC3Q7RTR2 1065 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 SLC38A6Q8IZM9 456 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 Q8TCH9 128 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 LRRC29Q8WV35 223 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 RDH5Q92781 318 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 TMEM230Q96A57 120 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 PIK3IP1Q96FE7 263 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 OR2V2Q96R30 315 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 RTBDNQ9BSG5 229 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-204ENST00000480057 CABLES2Q9BTV7 478 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 PIPOXQ9P0Z9 390 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 ERRFI1Q9UJM3 462 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-204ENST00000480057 PCDHB10Q9UN67 800 aa9.29□□□□□ -0.92
VTI1A-204ENST00000480057 PRRC2CQ9Y520 2896 aaKnown RBP9.28□□□□□ -0.92
VTI1A-204ENST00000480057 POLEQ07864 2286 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 hCG_1807616A0A1W2PRN6 198 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 TMEM30CPA0ZSE6 113 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 FAM221AA4D161 298 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 FAM90A27PA6NNH2 459 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 SIRPB1O00241 398 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 TUSC2O75896 110 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 SLC22A5O76082 557 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 IGHV1-46P01743 117 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 CD3EP07766 207 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 OR4A8P0C604 315 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 ZNF728P0DKX0 622 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 AKR1C4P17516 323 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 AGAP20933 346 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 FCGR2CP31995 323 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 HERV-K104P61576 105 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-204ENST00000480057 TESK1Q15569 626 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 EFNB3Q15768 340 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 BEX5Q5H9J7 111 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 FAM209AQ5JX71 171 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 LIN54Q6MZP7 749 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 C17orf107Q6ZR85 190 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 FAM185AQ8N0U4 392 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 ZNF808Q8N4W9 903 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-204ENST00000480057 ADAD2Q8NCV1 583 aaKnown RBP9.28□□□□□ -0.92
VTI1A-204ENST00000480057 GALNT11Q8NCW6 608 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 OR5M8Q8NGP6 311 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 OR11L1Q8NGX0 322 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 COQ8AQ8NI60 647 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 PPP1R35Q8TAP8 253 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 FXYD6Q9H0Q3 95 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 KCNJ16Q9NPI9 418 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 MBNL3Q9NUK0 354 aaKnown RBP9.28□□□□□ -0.92
VTI1A-204ENST00000480057 UFSP2Q9NUQ7 469 aa9.28□□□□□ -0.92
VTI1A-204ENST00000480057 DBX1A6NMT0 343 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 C17orf100A8MU93 164 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 SHISA9B4DS77 424 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 HSPB6O14558 160 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 GOSR2O14653 212 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 SPRY3O43610 288 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 PPYP01298 95 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 TNFRSF1AP19438 455 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 VAMP1P23763 118 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 DNASE1P24855 282 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 HMGN3Q15651 99 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 TRAT1Q6PIZ9 186 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 SGPP2Q8IWX5 399 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 GCSAMQ8N6F7 178 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 CCDC71LQ8N9Z2 235 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 ZBTB8BQ8NAP8 495 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-204ENST00000480057 OR2T35Q8NGX2 323 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 PLPPR1Q8TBJ4 325 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 CA5BP1Q8WTZ4 195 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 FAM222BQ8WU58 562 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 ITLN1Q8WWA0 313 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 VRK1Q99986 396 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-204ENST00000480057 RSRP1Q9BUV0 290 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 TMPRSS13Q9BYE2 586 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 NCOR1P1Q9H4R4 102 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 RAB18Q9NP72 206 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 RNF7Q9UBF6 113 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 OPN4Q9UHM6 478 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 PRR14LQ5THK1 2151 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 PIEZO2Q9H5I5 2752 aa9.27□□□□□ -0.93
VTI1A-204ENST00000480057 NCOR2Q9Y618 2525 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms