RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TXNIPQ9H3M7 391 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 HLA-DOBP13765 273 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 ZNF10P21506 573 aaPredicted RBP18.4■□□□□ 0.54
SDF4-206ENST00000478938 KLHL24Q6TFL4 600 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 C17orf99Q6UX52 265 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 ABHD12BQ7Z5M8 362 aaPredicted RBP18.4■□□□□ 0.54
SDF4-206ENST00000478938 CA13Q8N1Q1 262 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 APH1AQ96BI3 265 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 ATP5SQ99766 215 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 STARD5Q9NSY2 213 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 TET1Q8NFU7 2136 aa18.4■□□□□ 0.54
SDF4-206ENST00000478938 SERPINE3A8MV23 424 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 SEMA4FO95754 770 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 SLC35E2P0CK97 266 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 HOXB2P14652 356 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 PLA2G5P39877 138 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 TPPP2P59282 170 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 FAM78BQ5VT40 261 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 WDFY1Q8IWB7 410 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 C12orf76Q8N812 135 aaPredicted RBP18.39■□□□□ 0.54
SDF4-206ENST00000478938 RNF133Q8WVZ7 376 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 AGMATQ9BSE5 352 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 WWTR1Q9GZV5 400 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 TP53TG3Q9ULZ0 132 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 RNF114Q9Y508 228 aa18.39■□□□□ 0.54
SDF4-206ENST00000478938 ATG2AQ2TAZ0 1938 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 A0A0U1RQK1 487 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 ZNF320A2RRD8 509 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 RAC2P15153 192 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 LINC00310P59036 64 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 TMEM52BQ4KMG9 183 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 Q6ZN92 141 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 ZNF738Q8NE65 137 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 THAP3Q8WTV1 239 aaPredicted RBP18.39■□□□□ 0.53
SDF4-206ENST00000478938 SLAMF6Q96DU3 332 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 WIPI2Q9Y4P8 454 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 VCANP13611 3396 aa18.39■□□□□ 0.53
SDF4-206ENST00000478938 HSBP1L1C9JCN9 74 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 HINT1P49773 126 aaPredicted RBP18.38■□□□□ 0.53
SDF4-206ENST00000478938 LDLRAD2Q5SZI1 272 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 TCF23Q7RTU1 214 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 OR2V1Q8NHB1 315 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 TXN2Q99757 166 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 SLC45A2Q9UMX9 530 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 SHANK1Q9Y566 2161 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 IGHV2-70DA0A0C4DH43 119 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 IGKV1-9A0A0C4DH69 117 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 GPR89AB7ZAQ6 455 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 TGFBR3LH3BV60 316 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 GPR89BP0CG08 455 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 CCR2P41597 374 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 SLC6A8P48029 635 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 C1orf185Q5T7R7 199 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 FNDC7Q5VTL7 733 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 MRGPRGQ86SM5 289 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 MYPOPQ86VE0 399 aaPredicted RBP18.38■□□□□ 0.53
SDF4-206ENST00000478938 SLC38A9Q8NBW4 561 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 NUDT11Q96G61 164 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 PXMP4Q9Y6I8 212 aa18.38■□□□□ 0.53
SDF4-206ENST00000478938 ADMP35318 185 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 HNRNPA3P51991 378 aaKnown RBP18.37■□□□□ 0.53
SDF4-206ENST00000478938 SGCBQ16585 318 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 SPATA45Q537H7 98 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 SAXO1Q8IYX7 474 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 D2HGDHQ8N465 521 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 C16orf52Q8NHV5 167 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 RBM24Q9BX46 236 aaKnown RBP18.37■□□□□ 0.53
SDF4-206ENST00000478938 LOC102724200A0A096LPH7 203 aaPredicted RBP18.37■□□□□ 0.53
SDF4-206ENST00000478938 H3BP45 60 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 TNFRSF10CO14798 259 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 C8AP07357 584 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 SRP14P37108 136 aaKnown RBP18.37■□□□□ 0.53
SDF4-206ENST00000478938 UBE2G2P60604 165 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 PARLQ9H300 379 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 ZNF703Q9H7S9 590 aaPredicted RBP18.37■□□□□ 0.53
SDF4-206ENST00000478938 TRAV36DV7A0A075B6V5 113 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 ZNF737O75373 536 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 P2RY2P41231 377 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 ZNF157P51786 506 aaPredicted RBP18.37■□□□□ 0.53
SDF4-206ENST00000478938 ERASQ7Z444 233 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 PLEKHJ1Q9NW61 149 aa18.37■□□□□ 0.53
SDF4-206ENST00000478938 TMEM238LA0A1B0GVL6 79 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 H0YGG7 62 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 HYPMO75409 117 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 PDGFBP01127 241 aaPredicted RBP18.36■□□□□ 0.53
SDF4-206ENST00000478938 ATXN8OSP0DMR3 200 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 SEC13P55735 322 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 ARF3P61204 181 aaPredicted RBP18.36■□□□□ 0.53
SDF4-206ENST00000478938 RPL19P84098 196 aaKnown RBP18.36■□□□□ 0.53
SDF4-206ENST00000478938 WDYHV1Q96HA8 205 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 IGHV2OR16-5A0A0B4J2B6 119 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 A0A0U1RQV5 110 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 A0A1W2PQ45 241 aaPredicted RBP18.36■□□□□ 0.53
SDF4-206ENST00000478938 A0A1W2PQY0 241 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 F6UZH7 168 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 SERF1AO75920 110 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 GYPAP02724 150 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 ZNF17P17021 662 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 AADACP22760 399 aa18.36■□□□□ 0.53
SDF4-206ENST00000478938 KCNIP4Q6PIL6 250 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms