RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 C3orf62Q6ZUJ4 267 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 LYPD6Q86Y78 171 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 SGPP2Q8IWX5 399 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 LRRC18Q8N456 261 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 PNKDQ8N490 385 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 C10orf53Q8N6V4 93 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 OR10AD1Q8NGE0 317 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 OR4A16Q8NH70 328 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 C17orf50Q8WW18 174 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 SLC35B4Q969S0 331 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 RASD2Q96D21 266 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 C5orf30Q96GV9 206 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 TRNT1Q96Q11 434 aaKnown RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 YTHDF1Q9BYJ9 559 aaKnown RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 SLC22A4Q9H015 551 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 MEAF6Q9HAF1 191 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 ELL3Q9HB65 397 aaPredicted RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 C1orf109Q9NX04 203 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 MRPL39Q9NYK5 338 aaKnown RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 Q9UF83 564 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 AURKCQ9UQB9 309 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 RNF24Q9Y225 148 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 FOXA2Q9Y261 457 aaPredicted RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 NOP16Q9Y3C1 178 aaKnown RBP3.24□□□□□ -1.89
VPS50-214ENST00000477935 TIMM22Q9Y584 194 aa3.24□□□□□ -1.89
VPS50-214ENST00000477935 GMNCA6NCL1 334 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 TMEM114B3SHH9 223 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 F5H5P2 479 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 M0QZK8 103 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 PLPP3O14495 311 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 CFLARO15519 480 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 LYPLA1O75608 230 aaPredicted RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 DEDDO75618 318 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 PTBP3O95758 552 aaKnown RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 GYPAP02724 150 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 LAMP1P11279 417 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 NR2C1P13056 603 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 SDC1P18827 310 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 TAC1P20366 129 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 FASP25445 335 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 CD200P41217 278 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 CEBPDP49716 269 aaPredicted RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 SERPINB8P50452 374 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 RAB13P51153 203 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 SLC35B1P78383 322 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 KLRD1Q13241 179 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 MAB21L1Q13394 359 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 RBMY1FQ15415 496 aaKnown RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 HIST3H3Q16695 136 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 HAGHQ16775 308 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 MICBQ29980 383 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 GPAT3Q53EU6 434 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 UNC50Q53HI1 259 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 ZNF678Q5SXM1 525 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 MRPL2Q5T653 305 aaKnown RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 TEX36Q5VZQ5 186 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 CGB2Q6NT52 195 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 FBXW12Q6X9E4 464 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 LRRC74BQ6ZQY2 392 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 RPS27LQ71UM5 84 aaKnown RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 SLC35D2Q76EJ3 337 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 HDDC2Q7Z4H3 204 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 NUDCD3Q8IVD9 361 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 PEX5LQ8IYB4 626 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 CLDN22Q8N7P3 220 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 C19orf18Q8NEA5 215 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 MCHR2Q969V1 340 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 C12orf43Q96C57 262 aaKnown RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 FCRL1Q96LA6 429 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 ECSITQ9BQ95 431 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 OR2H1Q9GZK4 316 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 TSPYL1Q9H0U9 437 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 DNTTIP1Q9H147 329 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 OR51I1Q9H343 314 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 SLC25A19Q9HC21 320 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 STX18Q9P2W9 335 aaKnown RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 MLXQ9UH92 298 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 STARD10Q9Y365 291 aa3.23□□□□□ -1.89
VPS50-214ENST00000477935 TBL2Q9Y4P3 447 aaKnown RBP3.23□□□□□ -1.89
VPS50-214ENST00000477935 A8MT66 165 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 IQCF6A8MYZ5 107 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 CCRL2O00421 344 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 POLR3GO15318 223 aaPredicted RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 EIF3HO15372 352 aaKnown RBP eCLIP3.22□□□□□ -1.89
VPS50-214ENST00000477935 TSC22D2O75157 780 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 C6orf47O95873 294 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 MT-ATP6P00846 226 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 CST2P09228 141 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 GKN3PP0CG01 181 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 PGA4P0DJD7 388 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 PGA3P0DJD8 388 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 PGA5P0DJD9 388 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 NEFHP12036 1026 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 PRPS1L1P21108 318 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 RPS4Y1P22090 263 aaKnown RBP3.22□□□□□ -1.89
VPS50-214ENST00000477935 KIR3DL2P43630 455 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 TGM4P49221 684 aa3.22□□□□□ -1.89
VPS50-214ENST00000477935 ZNF133P52736 654 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms