RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CEBPDP49716 269 aaPredicted RBP8.46□□□□□ -1.05
CMC1-209ENST00000477739 GRB2P62993 217 aaKnown RBP8.46□□□□□ -1.05
CMC1-209ENST00000477739 SPEM2Q0P670 501 aa8.46□□□□□ -1.05
CMC1-209ENST00000477739 CYB5R2Q6BCY4 276 aa8.46□□□□□ -1.05
CMC1-209ENST00000477739 TBC1D26Q86UD7 250 aa8.46□□□□□ -1.05
CMC1-209ENST00000477739 EDEM2Q9BV94 578 aa8.46□□□□□ -1.05
CMC1-209ENST00000477739 NAA60Q9H7X0 242 aa8.46□□□□□ -1.05
CMC1-209ENST00000477739 ERRFI1Q9UJM3 462 aaPredicted RBP8.46□□□□□ -1.05
CMC1-209ENST00000477739 IGHV3-43A0A0B4J1X8 118 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 ZNF732B4DXR9 585 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 SLC34A2O95436 690 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 NGFP01138 241 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 IGHV3-43DP0DP04 118 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 BCL3P20749 454 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 HGFACQ04756 655 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 ZNF816Q0VGE8 651 aaPredicted RBP8.46□□□□□ -1.06
CMC1-209ENST00000477739 OR2T2Q6IF00 324 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 FAM53AQ6NSI3 398 aaPredicted RBP8.46□□□□□ -1.06
CMC1-209ENST00000477739 OR6X1Q8NH79 312 aa8.46□□□□□ -1.06
CMC1-209ENST00000477739 ARGFXA6NJG6 315 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 KIAA1324LA8MWY0 1029 aaPredicted RBP8.45□□□□□ -1.06
CMC1-209ENST00000477739 E5RGE8 158 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 ZNF587BE7ETH6 402 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 TRGC2P03986 189 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 FCGR3AP08637 254 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 MMP7P09237 267 aaPredicted RBP8.45□□□□□ -1.06
CMC1-209ENST00000477739 RHEBQ15382 184 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 ZNF239Q16600 458 aaKnown RBP8.45□□□□□ -1.06
CMC1-209ENST00000477739 OR2C3Q8N628 320 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 ADPRHL1Q8NDY3 354 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 KPTNQ9Y664 436 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 DMXL2Q8TDJ6 3036 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 IGKV1-27A0A075B6S5 117 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 PROB1E7EW31 1015 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 SPINK4O60575 86 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 IL2RAP01589 272 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 PRB4P10163 310 aaPredicted RBP8.45□□□□□ -1.06
CMC1-209ENST00000477739 ERVS71-1P61550 626 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 EWSR1Q01844 656 aaKnown RBP eCLIP8.45□□□□□ -1.06
CMC1-209ENST00000477739 ZNF100Q8IYN0 542 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 PSMF1Q92530 271 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 ZNF665Q9H7R5 613 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 MOB1AQ9H8S9 216 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 DNAJB11Q9UBS4 358 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 NOSIPQ9Y314 301 aaKnown RBP8.45□□□□□ -1.06
CMC1-209ENST00000477739 TIMM8BQ9Y5J9 83 aaPredicted RBP8.45□□□□□ -1.06
CMC1-209ENST00000477739 CEP295Q9C0D2 2601 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 NOTCH3Q9UM47 2321 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 LAMA5O15230 3695 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 CLN5O75503 358 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 SNAPC5O75971 98 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 IFNA5P01569 189 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 IFNA17P01571 189 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 CELA3AP09093 270 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 DUSP3P51452 185 aaPredicted RBP8.45□□□□□ -1.06
CMC1-209ENST00000477739 EDDM3AQ14507 147 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 PRR31Q5SQ13 230 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 UQCC3Q6UW78 93 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 DPPA2Q7Z7J5 298 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 ZNF429Q86V71 674 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 OR10D3Q8NH80 312 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 TMEM37Q8WXS4 190 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 FOXB1Q99853 325 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 NIPSNAP3BQ9BS92 247 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 SEMA5BQ9P283 1151 aa8.45□□□□□ -1.06
CMC1-209ENST00000477739 IGKV1-12A0A0C4DH73 117 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 A0A1W2PPQ1 181 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 H3BQ15 152 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 GPR137BO60478 399 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 DEDDO75618 318 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 IGKV1D-12P01611 117 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 CA6P23280 308 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 HOXA1P49639 335 aaPredicted RBP8.44□□□□□ -1.06
CMC1-209ENST00000477739 BTNL3Q6UXE8 466 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 IL34Q6ZMJ4 242 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 OR1F12Q8NHA8 337 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 RAB39BQ96DA2 213 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 DEFB127Q9H1M4 99 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 SLC25A22Q9H936 323 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 MSL2Q9HCI7 577 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 GSN-AS1Q9NRJ2 163 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 TRAPPC2LQ9UL33 140 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 WSB1Q9Y6I7 421 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 C3orf85A0A1B0GTC6 90 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 UBE2L5PA0A1B0GUS4 154 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 AQP7P3A6NL99 342 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 SERPINE3A8MV23 424 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 TRAPPC2LH3BP13 241 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 SYNGR1O43759 233 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 PPYP01298 95 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 LINC00205P59089 165 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 DLK1P80370 383 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 CNN3Q15417 329 aaKnown RBP8.44□□□□□ -1.06
CMC1-209ENST00000477739 EXT1Q16394 746 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 VHLLQ6RSH7 139 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 ZNF383Q8NA42 475 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 MRPL13Q9BYD1 178 aaKnown RBP8.44□□□□□ -1.06
CMC1-209ENST00000477739 BCO1Q9HAY6 547 aa8.44□□□□□ -1.06
CMC1-209ENST00000477739 OSGIN2Q9Y236 505 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms