RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 PRSS3P35030 304 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 CBX5P45973 191 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 RBM11P57052 281 aaKnown RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 AP3S2P59780 193 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 LCN2P80188 198 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 HOXA4Q00056 320 aaPredicted RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 RBM39Q14498 530 aaKnown RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 ESCO2Q56NI9 601 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 PYDC2Q56P42 97 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 SFRP4Q6FHJ7 346 aaPredicted RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 Q6ZTK2 550 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 NLRC3Q7RTR2 1065 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 TMEM104Q8NE00 496 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 C19orf18Q8NEA5 215 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 OR4M2Q8NGB6 313 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 LRRC29Q8WV35 223 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 FCAMRQ8WWV6 532 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 NEIL1Q96FI4 390 aaPredicted RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 NEDD4LQ96PU5 975 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 SSBP3Q9BWW4 388 aaPredicted RBP8.15□□□□□ -1.1
NIFK-205ENST00000477693 SRRQ9GZT4 340 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 TLN2Q9Y4G6 2542 aa8.15□□□□□ -1.1
NIFK-205ENST00000477693 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.15□□□□□ -1.14e-8■■■□□ 16.1
NIFK-205ENST00000477693 MALRD1Q5VYJ5 2156 aa8.15□□□□□ -1.11
NIFK-205ENST00000477693 TRAV18A0A075B6X5 111 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.14□□□□□ -1.11
NIFK-205ENST00000477693 J3QLI3 93 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 SYNGR1O43759 233 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 PDCD6O75340 191 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 ECDO95905 644 aaPredicted RBP8.14□□□□□ -1.11
NIFK-205ENST00000477693 HIST1H1DP16402 221 aaKnown RBP8.14□□□□□ -1.11
NIFK-205ENST00000477693 EGR1P18146 543 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 SRD5A1P18405 259 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 GLRA1P23415 457 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 LMO1P25800 156 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 BLVRBP30043 206 aaPredicted RBP8.14□□□□□ -1.11
NIFK-205ENST00000477693 CD80P33681 288 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 VEGFCP49767 419 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 NPY4RP50391 375 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 EFNB2P52799 333 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 TAS2R20P59543 309 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 DEFA1P59665 94 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 DEFA3P59666 94 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 ACTBP60709 375 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 GNB2P62879 340 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 ACTG1P63261 375 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 SCN1BQ07699 218 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 SRSF7Q16629 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
NIFK-205ENST00000477693 MICBQ29980 383 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 DCAF12L2Q5VW00 463 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 OR10K2Q6IF99 312 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 C16orf87Q6PH81 154 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 ZNF841Q6ZN19 808 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 IL17RELQ6ZVW7 336 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 Q8N402 240 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 OR8B3Q8NGG8 313 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 PPP1R35Q8TAP8 253 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 SETD6Q8TBK2 473 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 SMIM4Q8WVI0 70 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 EMG1Q92979 244 aaKnown RBP8.14□□□□□ -1.11
NIFK-205ENST00000477693 SLAMF9Q96A28 289 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 OR8B2Q96RD0 313 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 TMPRSS13Q9BYE2 586 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 DNTTIP1Q9H147 329 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 AUNIPQ9H7T9 357 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 PLEKHJ1Q9NW61 149 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 KAAG1Q9UBP8 84 aa8.14□□□□□ -1.11
NIFK-205ENST00000477693 MRPS7Q9Y2R9 242 aaKnown RBP8.14□□□□□ -1.11
NIFK-205ENST00000477693 FOXI3A8MTJ6 420 aaPredicted RBP8.13□□□□□ -1.11
NIFK-205ENST00000477693 MCRIP1C9JLW8 97 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 DEGS1O15121 323 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 PHF1O43189 567 aaPredicted RBP8.13□□□□□ -1.11
NIFK-205ENST00000477693 RHBDL1O75783 438 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 UPK1BO75841 260 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 RBBP9O75884 186 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 PLATP00750 562 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 GYPAP02724 150 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 LPLP06858 475 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 TBPP20226 339 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 BCL3P20749 454 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 NPBWR2P48146 333 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 INPP1P49441 399 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 MRPS15P82914 257 aaKnown RBP8.13□□□□□ -1.11
NIFK-205ENST00000477693 PAX2Q02962 417 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 ZNF79Q15937 498 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 ZNF260Q3ZCT1 412 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 CDNFQ49AH0 187 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 DMRTC1Q5HYR2 192 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 TRIQKQ629K1 86 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 FAHD2BQ6P2I3 314 aaPredicted RBP8.13□□□□□ -1.11
NIFK-205ENST00000477693 LYPD2Q6UXB3 125 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 C1orf229Q6ZS94 237 aaPredicted RBP8.13□□□□□ -1.11
NIFK-205ENST00000477693 RNF144BQ7Z419 303 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 TEX29Q8N6K0 151 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 BOLLQ8N9W6 283 aaKnown RBP8.13□□□□□ -1.11
NIFK-205ENST00000477693 DEFB108BQ8NET1 73 aa8.13□□□□□ -1.11
NIFK-205ENST00000477693 DACT3Q96B18 629 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms