RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 AGFG2O95081 481 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 IFNA21P01568 189 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 WNT2P09544 360 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 ZNF44P15621 663 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 TNFSF4P23510 183 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 FCGR2CP31995 323 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 MPV17P39210 176 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 KLF3P57682 345 aaPredicted RBP6.74□□□□□ -1.33
VMA21-203ENST00000477649 OR2F1Q13607 317 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 ZNF345Q14585 488 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 TSC22D1Q15714 1073 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 SMIM21Q3B7S5 101 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 PAN3Q58A45 887 aaKnown RBP6.74□□□□□ -1.33
VMA21-203ENST00000477649 Q6P435 159 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 TRAT1Q6PIZ9 186 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 CLEC18BQ6UXF7 455 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 LRTM2Q8N967 370 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 CCDC120Q96HB5 630 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 CNTNAP3BQ96NU0 1288 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 HDHD3Q9BSH5 251 aaPredicted RBP6.74□□□□□ -1.33
VMA21-203ENST00000477649 CNTNAP3Q9BZ76 1288 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 WDR13Q9H1Z4 485 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 CRIM1Q9NZV1 1036 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 Q9UFV3 132 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 ZDHHC8Q9ULC8 765 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 DOCK7Q96N67 2140 aa6.74□□□□□ -1.33
VMA21-203ENST00000477649 IGKV1D-8A0A087WSZ0 117 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TRAV24A0A0B4J272 114 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TEX13DA0A0J9YY54 714 aaPredicted RBP6.73□□□□□ -1.33
VMA21-203ENST00000477649 DUXBA0A1W2PPF3 345 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TMEM8BA6NDV4 472 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 G3V3Q6 166 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 SMLR1H3BR10 107 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 M0R1B8 84 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 CDIPTO14735 213 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TUSC2O75896 110 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 PPYP01298 95 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 RPS2P15880 293 aaKnown RBP6.73□□□□□ -1.33
VMA21-203ENST00000477649 BMP5P22003 454 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 S100A1P23297 94 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 GLRA1P23415 457 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 CD40P25942 277 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 GATA4P43694 442 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 FABP6P51161 128 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 ZNF81P51508 661 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 ZNF83P51522 516 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 ERVS71-1P61550 626 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 HLA-DRB3P79483 266 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 DAZAP2Q15038 168 aaPredicted RBP6.73□□□□□ -1.33
VMA21-203ENST00000477649 MSMO1Q15800 293 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 LGALSLQ3ZCW2 172 aaPredicted RBP6.73□□□□□ -1.33
VMA21-203ENST00000477649 LY6G6FQ5SQ64 297 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 SLC35E4Q6ICL7 350 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 C11orf87Q6NUJ2 197 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 RTN4RL2Q86UN3 420 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 CMTM1Q8IZ96 169 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 ZNF565Q8N9K5 539 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 ADAD2Q8NCV1 583 aaKnown RBP6.73□□□□□ -1.33
VMA21-203ENST00000477649 ST6GALNAC3Q8NDV1 305 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 OR11H4Q8NGC9 324 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 THAP6Q8TBB0 222 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 MRPL30Q8TCC3 161 aaKnown RBP6.73□□□□□ -1.33
VMA21-203ENST00000477649 CASTOR1Q8WTX7 329 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 MAFIPQ8WZ33 124 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TMEM230Q96A57 120 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 KIRREL1Q96J84 757 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 C2orf50Q96LR7 162 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 CABLES2Q9BTV7 478 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 RSRP1Q9BUV0 290 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 C1QTNF6Q9BXI9 259 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 NCOR1P1Q9H4R4 102 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 NAA60Q9H7X0 242 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 FN3KRPQ9HA64 309 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TMEM165Q9HC07 324 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 RAB9BQ9NP90 201 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 LUZP4Q9P127 313 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TAAR3PQ9P1P4 343 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TINAGQ9UJW2 476 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 FBXO9Q9UK97 447 aaPredicted RBP6.73□□□□□ -1.33
VMA21-203ENST00000477649 WIPI2Q9Y4P8 454 aa6.73□□□□□ -1.33
VMA21-203ENST00000477649 TRBV6-7A0A0A0MS04 114 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 TMEM30CPA0ZSE6 113 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 C5orf51A6NDU8 294 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 A6NLC8 198 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 F8VVB4 439 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 F8VWA3 439 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 GPR31O00270 319 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 SLC33A1O00400 549 aaPredicted RBP6.72□□□□□ -1.33
VMA21-203ENST00000477649 MLNRO43193 412 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 ZNHIT1O43257 154 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 RHBDL1O75783 438 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 OR2H2O95918 312 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 HAND1O96004 215 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 GRPP07492 148 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 ADH4P08319 380 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 PSMB6P28072 239 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 S100A11P31949 105 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 NUP62P37198 522 aaPredicted RBP6.72□□□□□ -1.33
VMA21-203ENST00000477649 PIGPP57054 158 aa6.72□□□□□ -1.33
VMA21-203ENST00000477649 SUPT4H1P63272 117 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms