RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 CD37P11049 281 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 SLC2A2P11168 524 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-221ENST00000477561 PRKACBP22694 351 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 MPZP25189 248 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 AZGP1P25311 298 aaKnown RBP6.79□□□□□ -1.32
HDAC6-221ENST00000477561 PTBP1P26599 531 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC6-221ENST00000477561 HTR2CP28335 458 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 NPBWR2P48146 333 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 POU3F4P49335 361 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 RBP2P50120 134 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 PPP5CP53041 499 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 ATP1B3P54709 279 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 SNU13P55769 128 aaKnown RBP6.79□□□□□ -1.32
HDAC6-221ENST00000477561 MTCP1P56278 107 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 BPIFB3P59826 476 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 ERVK11-1P61568 191 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 COL10A1Q03692 680 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 IL24Q13007 206 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 AWAT1Q58HT5 328 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 UBE2NLQ5JXB2 153 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 ASPHD2Q6ICH7 369 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 C16orf87Q6PH81 154 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 BAIAP2L2Q6UXY1 529 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 Q6YL49 198 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 MFSD4AQ8N468 514 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 JAGN1Q8N5M9 183 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 C3orf56Q8N813 242 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 SAMD12Q8N8I0 201 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 DNAAF1Q8NEP3 725 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 C8orf46Q8TAG6 207 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 SLC25A28Q96A46 364 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 SPSB1Q96BD6 273 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 SPACA5Q96QH8 159 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 GFI1Q99684 422 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 LIN7BQ9HAP6 207 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 HES4Q9HCC6 221 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 C19orf12Q9NSK7 152 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 IL36RNQ9UBH0 155 aa6.79□□□□□ -1.32
HDAC6-221ENST00000477561 ANGPTL7O43827 346 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 KNG1P01042 644 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 TK1P04183 234 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 MELTFP08582 738 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 HKR1P10072 659 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 SNRPBP14678 240 aaKnown RBP6.78□□□□□ -1.32
HDAC6-221ENST00000477561 ARSBP15848 533 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 CCL3L1P16619 93 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 BCL3P20749 454 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 OMGP23515 440 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 DUSP1P28562 367 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF93P35789 620 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-221ENST00000477561 COMPP49747 757 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-221ENST00000477561 ERVFRD-1P60508 538 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 GUCA2AQ02747 115 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 FAM189A2Q15884 450 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 C1orf100Q5SVJ3 147 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 TMEM200BQ69YZ2 307 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 CNIH2Q6PI25 160 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 FIP1L1Q6UN15 594 aaKnown RBP6.78□□□□□ -1.32
HDAC6-221ENST00000477561 FAM131AQ6UXB0 335 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 ZNF561Q8N587 486 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 KIR3DL3Q8N743 410 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 ASCC1Q8N9N2 400 aaKnown RBP6.78□□□□□ -1.32
HDAC6-221ENST00000477561 OR52N4Q8NGI2 321 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 OR51A2Q8NGJ7 313 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 OR5D18Q8NGL1 313 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 LGALS14Q8TCE9 139 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 C15orf40Q8WUR7 153 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 TNFRSF14Q92956 283 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 EMG1Q92979 244 aaKnown RBP6.78□□□□□ -1.32
HDAC6-221ENST00000477561 FAM3DQ96BQ1 224 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 GPER1Q99527 375 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 CCDC32Q9BV29 185 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 CHIAQ9BZP6 476 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 MIXL1Q9H2W2 232 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 PRDM13Q9H4Q3 707 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 RBFOX1Q9NWB1 397 aaKnown RBP6.78□□□□□ -1.32
HDAC6-221ENST00000477561 EXTL2Q9UBQ6 330 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 GHRLQ9UBU3 117 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 FAM96BQ9Y3D0 163 aa6.78□□□□□ -1.32
HDAC6-221ENST00000477561 FBN3Q75N90 2809 aa6.77□□□□□ -1.32
HDAC6-221ENST00000477561 TRBV23-1A0A0A0MS06 115 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 TMEM82A0PJX8 343 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 MEIOCA2RUB1 952 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 CLDN34H7C241 214 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 M0R1W7 72 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 NPFFO15130 113 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 TPPPO94811 219 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 BPNT1O95861 308 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 CYB5AP00167 134 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 PAHP00439 452 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 IGHV4-59P01825 116 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 UBBP0CG47 229 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 PRKACAP17612 351 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 ELK1P19419 428 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 PAX6P26367 422 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 CLDN12P56749 244 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 RPL31P62899 125 aaKnown RBP6.77□□□□□ -1.33
HDAC6-221ENST00000477561 PITPNAQ00169 270 aa6.77□□□□□ -1.33
HDAC6-221ENST00000477561 IL18Q14116 193 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms