RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FXYD6P3P58550 94 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 SELENOVP59797 346 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CSNK1G2P78368 415 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PAX2Q02962 417 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 Q0VG73 95 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 HSPB3Q12988 150 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 MRPL49Q13405 166 aaKnown RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 RUNX3Q13761 415 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 EIF2B1Q14232 305 aaKnown RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CNN3Q15417 329 aaKnown RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR1Q1Q15612 314 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CEBPEQ15744 281 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PLPPR5Q32ZL2 321 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 SNAI3Q3KNW1 292 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ITPRIPL2Q3MIP1 535 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 WDR73Q6P4I2 378 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 KCTD18Q6PI47 426 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 SPSB3Q6PJ21 355 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 WDR74Q6RFH5 385 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PARM1Q6UWI2 310 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 COX15Q7KZN9 410 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 VASH2Q86V25 355 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CDC20BQ86Y33 519 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 KMT5CQ86Y97 462 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 FAM219AQ8IW50 185 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 C1orf174Q8IYL3 243 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 UBALD2Q8IYN6 164 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 DCAF4L2Q8NA75 395 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CADM4Q8NFZ8 388 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR5A2Q8NGI9 324 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR13C9Q8NGT0 318 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR5H2Q8NGV7 314 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR2G3Q8NGZ4 309 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CMTM2Q8TAZ6 248 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 MARCH1Q8TCQ1 289 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ABHD3Q8WU67 409 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 TSEN15Q8WW01 171 aaKnown RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 MBD3L1Q8WWY6 194 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 LIPHQ8WWY8 451 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PSMF1Q92530 271 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 FGF14Q92915 247 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 SPSB1Q96BD6 273 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PINX1Q96BK5 328 aaKnown RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 GPR146Q96CH1 333 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ZMYND19Q96E35 227 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 REEP6Q96HR9 211 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF845Q96IR2 970 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 C4orf45Q96LM5 186 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR7D2Q96RA2 312 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ELOVL1Q9BW60 279 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 RSPO3Q9BXY4 272 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 TPSD1Q9BZJ3 242 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 OR51I2Q9H344 312 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 GLIPR2Q9H4G4 154 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PLEKHF2Q9H8W4 249 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 WDR76Q9H967 626 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 DECR2Q9NUI1 292 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF586Q9NXT0 402 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ELOVL5Q9NYP7 299 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 DEC1Q9P2X7 70 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 LHX3Q9UBR4 397 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 PRSS50Q9UI38 385 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 AK3Q9UIJ7 227 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 KLK13Q9UKR3 277 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 DHDHQ9UQ10 334 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 CCL26Q9Y258 94 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 MRPS17Q9Y2R5 130 aaKnown RBP4.08□□□□□ -1.76
PTCD3-212ENST00000477520 MSRB2Q9Y3D2 182 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 WNT6Q9Y6F9 365 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 REV3LO60673 3130 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 BDP1A6H8Y1 2624 aa4.08□□□□□ -1.76
PTCD3-212ENST00000477520 ZDBF2Q9HCK1 2354 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 CDH23Q9H251 3354 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TRAV8-7A0A075B6U6 113 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 SAA2-SAA4A0A096LPE2 208 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 IGHV2-26A0A0B4J1V2 119 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 A0A1W2PRS3 328 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 J3QR89 54 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 PLPP1O14494 284 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 AQP7O14520 342 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 TBL1XO60907 577 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 B4GALT2O60909 372 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 NDUFB8O95169 186 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 GOSR1O95249 250 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 NRASP01111 189 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 KRASP01116 189 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 HMGN2P05204 90 aaKnown RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 OR10J4P0C629 311 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 IGLC2P0DOY2 106 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 IGLC3P0DOY3 106 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 BCL2P10415 239 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 AK4P27144 223 aaPredicted RBP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 PSMB5P28074 263 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 GABRA3P34903 492 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 HRH1P35367 487 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 PSMB10P40306 273 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 CTRLP40313 264 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 NPBWR2P48146 333 aa4.07□□□□□ -1.76
PTCD3-212ENST00000477520 NCBP2P52298 156 aaKnown RBP eCLIP4.07□□□□□ -1.76
PTCD3-212ENST00000477520 ZNF136P52737 540 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms