RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 OXA1LQ15070 435 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 DEFB112Q30KQ8 113 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 AWAT2Q6E213 333 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 BRICD5Q6PL45 260 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 C1orf122Q6ZSJ8 110 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 GDPD3Q7L5L3 318 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 CMTM4Q8IZR5 234 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 OSR2Q8N2R0 312 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 TMEM104Q8NE00 496 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 OR5D13Q8NGL4 314 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 COQ2Q96H96 371 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 DUX5Q96PT3 197 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 AIFM2Q9BRQ8 373 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 KCNK15Q9H427 330 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 BANF2Q9H503 90 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 TCF7L1Q9HCS4 588 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 NDUFB11Q9NX14 153 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 GLS2Q9UI32 602 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 MRPS28Q9Y2Q9 187 aaKnown RBP7.93□□□□□ -1.14
HDAC3-208ENST00000476739 AK6Q9Y3D8 172 aaKnown RBP7.93□□□□□ -1.14
HDAC3-208ENST00000476739 KIAA2026Q5HYC2 2103 aa7.93□□□□□ -1.14
HDAC3-208ENST00000476739 FBN1P35555 2871 aaKnown RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 A0A0U1RQK1 487 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 C17orf98A8MV24 154 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 MGST3O14880 152 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 MMP23AO75900 390 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 CSTBP04080 98 aaKnown RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 CD37P11049 281 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 PRTN3P24158 256 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 PSMB9P28065 219 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 BMXP51813 675 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 RBM11P57052 281 aaKnown RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 GNG2P59768 71 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 SCGB2A2Q13296 93 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 IL13RA2Q14627 380 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 TRAM1Q15629 374 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 TAF9Q16594 264 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 OR10K2Q6IF99 312 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 BAIAP2L2Q6UXY1 529 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF782Q6ZMW2 699 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 USP43Q70EL4 1123 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 CDH26Q8IXH8 852 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 SVOPQ8N4V2 548 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 NKAIN3Q8N8D7 197 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 PLPPR1Q8TBJ4 325 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 TBC1D15Q8TC07 691 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF418Q8TF45 676 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 GIMAP1Q8WWP7 306 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 PHYHIPQ92561 330 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 THRSPQ92748 146 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 ISOC1Q96CN7 298 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 S100A13Q99584 98 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 SUCNR1Q9BXA5 334 aa7.92□□□□□ -1.14
HDAC3-208ENST00000476739 METTL8Q9H825 291 aaKnown RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 UNKLQ9H9P5 680 aaKnown RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 RABL2AQ9UBK7 228 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-208ENST00000476739 TRAV39A0A0B4J263 110 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 MEGF11A6BM72 1044 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 DNAJC9-AS1A6NH13 148 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 RNF212BA8MTL3 300 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 CCRL2O00421 344 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF780AO75290 641 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 OR7C1O76099 320 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF728P0DKX0 622 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 GTF2F2P13984 249 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 COX7A1P24310 79 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 PSMA1P25786 263 aaKnown RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 PAX6P26367 422 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 ERP29P30040 261 aaKnown RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 GDNFP39905 211 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 P2RX3P56373 397 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 NEDD8Q15843 81 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 PAN3Q58A45 887 aaKnown RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 NHLRC3Q5JS37 347 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 KRBOX4Q5JUW0 171 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 C1orf100Q5SVJ3 147 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 UTF1Q5T230 341 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 CD200R1LQ6Q8B3 271 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 SUMF2Q8NBJ7 301 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 CHST4Q8NCG5 386 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 PPP1R35Q8TAP8 253 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 TAF15Q92804 592 aaKnown RBP eCLIP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 FAM46BQ96A09 425 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 SLC25A28Q96A46 364 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 AJUBAQ96IF1 538 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 ZNF714Q96N38 554 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 UQCC2Q9BRT2 126 aa7.91□□□□□ -1.14
HDAC3-208ENST00000476739 DPCDQ9BVM2 203 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 ZMAT5Q9UDW3 170 aaKnown RBP7.91□□□□□ -1.14
HDAC3-208ENST00000476739 A0A0A6YYJ9 748 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 TRDV1A0A1B0GX56 115 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 hADV38S2A0JD32 116 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 ODAMA1E959 279 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 FAM25AB3EWG3 89 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 FAM25CB3EWG5 89 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 FAM25GB3EWG6 89 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 NPFFO15130 113 aa7.9□□□□□ -1.14
HDAC3-208ENST00000476739 HOXA3O43365 443 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms